GCGAA TCCCACTCCA ACTTCTGCCA Y TTGCTTCCGC CCCCACATCC TCCGT Y = C/T Note: Sequence in lower case indicates low-complexity or repetitive sequence |
Assay ID | Submitter SNP ID |
Submitter Handle |
Population | ss orientation |
Variation Type | 129S1/SvImJ |
A/J |
AKR/J |
BALB/cByJ |
C3H/HeJ |
CAST/EiJ |
DBA/2J |
FVB/NJ |
MOLF/EiJ |
NOD/ShiLtJ |
NZW/LacJ |
PWD/PhJ |
WSB/EiJ |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
ss51959747 | NES14967642 | PERLEGEN | MM_PANEL2 | f | SNP | C | C | C | C | C | T | C | T | T | C | C | T | C |
SNP Consensus Information | ||||||||||||||||||
SNP | Consensus Type | 129S1/SvImJ |
A/J |
AKR/J |
BALB/cByJ |
C3H/HeJ |
CAST/EiJ |
DBA/2J |
FVB/NJ |
MOLF/EiJ |
NOD/ShiLtJ |
NZW/LacJ |
PWD/PhJ |
WSB/EiJ |
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rs36587850 | SNP | C | C | C | C | C | T | C | T | T | C | C | T | C |
Assay ID | Submitter SNP ID |
Submitter Handle |
Population | ss orientation |
Variation Type |
Alleles |
---|---|---|---|---|---|---|
ss51959747 | NES14967642 | PERLEGEN | MM_PANEL | f | SNP | C/T |
Location: Chr8:47387358 () rs orientation: forward | ||||||||
Symbol | Name | Transcript | Protein | Function Class |
Allele | Residue | Codon Position |
AA Position |
---|---|---|---|---|---|---|---|---|
Gm64146 | predicted gene, 64146 | 501 bp downstream | ||||||
Rr663147 | regulatory region 663147 | within coordinates | ||||||
Rr663148 | regulatory region 663148 | 486 bp proximal | ||||||
Rr663149 | regulatory region 663149 | 768 bp proximal | ||||||
Rr663150 | regulatory region 663150 | 1815 bp proximal | ||||||
Rr663151 | regulatory region 663151 | 1970 bp proximal | ||||||
Tssr77327 | transcription start site region 77327 | 154 bp upstream |
Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Models of Human Cancer database (MMHCdb) (formerly Mouse Tumor Biology (MTB)), Gene Ontology (GO) |
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last database update 03/25/2025 MGI 6.24 |
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