rs3659361 SNP Detail

Summary

• ID
  rs3659361
• Variation Type
  SNP
• Alleles
  G/T

• Created in dbSNP Build
  107
• Last Updated in dbSNP Build
  142
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr19:15339305 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                        AAATA AATAAAATAA AACATACACA
  K
  AATAATTAAG CATGCTTTAT TTTTT                                      
  
  K = G/T
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129S1/SvImJ	129X1/SvJ	A/J	AKR/J	BALB/cByJ	BTBR T<+> Itpr3/J	C57BL/6J	DBA/2J	FVB/NJ	KK/HlJ	LG/J	NOD/ShiLtJ	SM/J
ss5035276	WI_WGS_19_14961694	WI	MOUSE	f	SNP					G		T
ss44995309	mCV24411950	ABI	CRAMUS_MOUSE	f	SNP	T	T	G				T	G
ss50645658	NES13623928	PERLEGEN	MM_PANEL2	f	SNP	T		G	G		T			T	T		G
ss146081774	ENSMUSSNP7058129	ENSEMBL	ENSEMBL_Sanger	f	SNP		T	G					G
ss325722974	CHEV_19_15436431	CHEVERUD	SCREENING_POP	f	SNP											T		G
SNP Consensus Information
SNP					Consensus Type	129S1/SvImJ	129X1/SvJ	A/J	AKR/J	BALB/cByJ	BTBR T<+> Itpr3/J	C57BL/6J	DBA/2J	FVB/NJ	KK/HlJ	LG/J	NOD/ShiLtJ	SM/J
rs3659361					SNP	T	T	G	G	G	T	T	G	T	T	T	G	G

Additional submitted assays for this SNP, where the strain of origin for observed alleles is not specified by the submitter

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	Alleles
ss50645658	NES13623928	PERLEGEN	MM_PANEL	f	SNP	G/T

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr19:15339305 () rs orientation: forward

Symbol	Name	Function Class
Cpgi10647	CpG island 10647	408 bp proximal
Pomc-ps1	pro-opiomelanocortin, pseudogene 1	394 bp upstream