rs36596435 SNP Detail

Summary

• ID
  rs36596435
• Variation Type
  SNP
• Alleles
  A/C

• Created in dbSNP Build
  126
• Last Updated in dbSNP Build
  126
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr3:129127265 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                        CCATTGCTGA CAATGGCAAT GCAAACGTAA TGTAGCTATG
  GAGGTTTTGA GAATTATATA TAGTATTTTC TATAAGGTAC TTTATAGAAA CTAGCATACA
  M
  ATTTTTTCCC ACAATCCCAT GCAATTGATT CTATTTGGCT GCCTGTTATA GAGATGGTGA
  AGGACACGCA GCTGGCAGTA GCAGAATTGG TGTCTGAGTT                      
  
  M = A/C
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129S1/SvImJ	A/J	AKR/J	BALB/cByJ	BTBR T<+> Itpr3/J	C3H/HeJ	CAST/EiJ	DBA/2J	FVB/NJ	KK/HlJ	NOD/ShiLtJ	PWD/PhJ
ss51623285	NES14655933	PERLEGEN	MM_PANEL2	f	SNP	A	A	A	A	A	A	C	A	A	A	A	C
SNP Consensus Information
SNP					Consensus Type	129S1/SvImJ	A/J	AKR/J	BALB/cByJ	BTBR T<+> Itpr3/J	C3H/HeJ	CAST/EiJ	DBA/2J	FVB/NJ	KK/HlJ	NOD/ShiLtJ	PWD/PhJ
rs36596435					SNP	A	A	A	A	A	A	C	A	A	A	A	C

Additional submitted assays for this SNP, where the strain of origin for observed alleles is not specified by the submitter

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	Alleles
ss51623285	NES14655933	PERLEGEN	MM_PANEL	f	SNP	A/C

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr3:129127265 () rs orientation: forward

Symbol	Name	Function Class
Enpep	glutamyl aminopeptidase	896 bp upstream
Tssr1044	transcription start site region 1044	1306 bp upstream
Tssr1045	transcription start site region 1045	1080 bp upstream
Tssr35615	transcription start site region 35615	890 bp upstream