rs3660035 SNP Detail

Summary

• ID
  rs3660035
• Variation Type
  SNP
• Alleles
  A/G

• Created in dbSNP Build
  107
• Last Updated in dbSNP Build
  142
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr12:12586458 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                        CATGC ACTGGGGACA AAGTATTCAA
  R
  TGCTTGAGAC TGTGGAAGAC ATCTC                                      
  
  R = A/G
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	A/J	C3H/HeJ	C57BL/6J	DBA/2J	LG/J	SM/J
ss5035954	WI_WGS_12_12629290	WI	MOUSE	f	SNP		A	G
ss137142629	ENSMUSSNP3165391	ENSEMBL	ENSEMBL_Sanger	f	SNP	G			A
ss323899629	CHEV_12_12543263	CHEVERUD	SCREENING_POP	f	SNP					A	A
SNP Consensus Information
SNP					Consensus Type	A/J	C3H/HeJ	C57BL/6J	DBA/2J	LG/J	SM/J
rs3660035					SNP	G	A	G	A	A	A

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr12:12586458 () rs orientation: forward

Symbol	Name	Function Class
Rr266589	regulatory region 266589	1258 bp distal