rs36601598 SNP Detail

Summary

• ID
  rs36601598
• Variation Type
  SNP
• Alleles
  A/G

• Created in dbSNP Build
  126
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr7:73460725 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                              CAAGTGACTA TGGACCAAAG
  CCTTGGAAAC CATGAGCCAA TTAAACCTCT TTTCCTTTAA GTGATTTTTC TCAGGCATTT
  TGTCACAGCA GTGGAAAGCT AACATAGGGC AGGACCGAGT TGAGTCAGGA GATTATTTTA
  CTCTCCCTGT TGAGTTTGGG AATAGATACA AGTGGCTATC AGTTTATGCT GATGAGGGAA
  R
  AGAGGCACGG GCTTGGACCT GGTTTTATAC CAGGAGGGAA TATACCCCAT ACTTTAGGCT
  GTTGCCTTTG TGCCTGTCTT TTCCGACTGC ACTGTGCATT GCTGGTACCA TATATCCATT
  AGAAGCACCA AGCCAATGCT TAGGAGATAG AAAGGACCAA GTATGTGCCC TTGGCCCCAT
  TCAGGATGTT GGAGCTGGGT                                            
  
  R = A/G
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129S1/SvImJ	A/J	AKR/J	BALB/cByJ	BTBR T<+> Itpr3/J	C3H/HeJ	CAST/EiJ	DBA/2J	FVB/NJ	KK/HlJ	MOLF/EiJ	NOD/ShiLtJ	NZW/LacJ	PWD/PhJ	WSB/EiJ
ss51503107	NES13953247	PERLEGEN	MM_PANEL2	f	SNP	G	G	G	G	G	G	G	G	G	G	G	G	G	A	G
SNP Consensus Information
SNP					Consensus Type	129S1/SvImJ	A/J	AKR/J	BALB/cByJ	BTBR T<+> Itpr3/J	C3H/HeJ	CAST/EiJ	DBA/2J	FVB/NJ	KK/HlJ	MOLF/EiJ	NOD/ShiLtJ	NZW/LacJ	PWD/PhJ	WSB/EiJ
rs36601598					SNP	G	G	G	G	G	G	G	G	G	G	G	G	G	A	G

Additional submitted assays for this SNP, where the strain of origin for observed alleles is not specified by the submitter

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	Alleles
ss51503107	NES13953247	PERLEGEN	MM_PANEL	f	SNP	A/G

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr7:73460725 () rs orientation: forward

Symbol	Name	Function Class
Gm10619	predicted gene 10619	within coordinates
Rr157913	regulatory region 157913	1325 bp distal
Rr165726	regulatory region 165726	1279 bp distal