rs36610162 SNP Detail

Summary

• ID
  rs36610162
• Variation Type
  SNP
• Alleles
  C/T

• Created in dbSNP Build
  126
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr6:59014166 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                              CCAACTTGGG GAATAAGTTT
  CTTGCACAAA ATGGAATAAG AGAGTCTTTG CAGGGCAAAC CTTCCTTGAG AAAGTAAAAC
  ATCAGAAAGT CTGTGTCACA ACTTTGTCCA CATTTGACAG CACTTACTAT AAAAGCCAGA
  AGGAGAAAAT ATGTAAACAT GCCATTTCAG CAAATGAGTG TTCGTCTCTG GATGCTGAGG
  Y
  GCTCAATCAA GAAATACCAG GGTCCAGGCT CACAGACACA TTAGATTCTG TGCTCAGGAT
  TTGGAGCAGA AAGAAAAAAA TCATGTTGGA ATGAAAACAG AAAGATGTAC CACCCCGTGA
  AGCATCAGTA ACCTTCAACT ATTCAAAAAG ATGGAAGTTT CTCATTGAAA GAAACCAGAG
  GAGAATGAAA GAGAAAGCAA                                            
  
  Y = C/T
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	AKR/J	BALB/cByJ	C3H/HeJ	CAST/EiJ	MOLF/EiJ	PWD/PhJ	WSB/EiJ
ss51665166	NES14830113	PERLEGEN	MM_PANEL2	f	SNP	T	C	C	C	T	T	C
SNP Consensus Information
SNP					Consensus Type	AKR/J	BALB/cByJ	C3H/HeJ	CAST/EiJ	MOLF/EiJ	PWD/PhJ	WSB/EiJ
rs36610162					SNP	T	C	C	C	T	T	C

Additional submitted assays for this SNP, where the strain of origin for observed alleles is not specified by the submitter

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	Alleles
ss51665166	NES14830113	PERLEGEN	MM_PANEL	f	SNP	C/T

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr6:59014166 () rs orientation: forward

Symbol	Name	Function Class
Gm19165	predicted gene, 19165	within coordinates