rs36610337 SNP Detail

Summary

• ID
  rs36610337
• Variation Type
  SNP
• Alleles
  A/T

• Created in dbSNP Build
  126
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr3:68313732 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                              TTACAGTGGA CGGTTAACAC
  AGGTTCAAGC AACGCAGCAG CCATCAAATC AGTTCAAGGG GTGATACTGA AATCCCTTGA
  CAGCACACTT AGCTCTTCCT CACTCTGGCA GCTGCTGGAG AAAGTTAAGA CTATATATTA
  GATACCCGGT GAGTTTGAGT CTATTTTTTG AACACAGATC TCCTAATCCT GAATGCATAG
  W
  CCCCAGGAAG AAAGGAGAAA GGAAACAGCA GTGAGGGCTT TGGTTGAATC CAGTCTCTGC
  TTATCTCCAC CACGCAAGCA GCCTCACCAG GGAGTAGGGC GGCTGCATCT GAAAGGATGC
  TCTAGCTGAT GGCAGCTGTG AACCAGCCGG TGGCACAAAC CCATAGGGTC ACCTCTTTGC
  TTTAATATGA TCTGTGTTGA                                            
  
  W = A/T
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129S1/SvImJ	A/J	AKR/J	BALB/cByJ	BTBR T<+> Itpr3/J	C3H/HeJ	DBA/2J	FVB/NJ	KK/HlJ	MOLF/EiJ	NOD/ShiLtJ	NZW/LacJ	PWD/PhJ	WSB/EiJ
ss50975078	NES13920825	PERLEGEN	MM_PANEL2	f	SNP	A	A	A	A	A	A	A	A	A	A	A	A	T	A
SNP Consensus Information
SNP					Consensus Type	129S1/SvImJ	A/J	AKR/J	BALB/cByJ	BTBR T<+> Itpr3/J	C3H/HeJ	DBA/2J	FVB/NJ	KK/HlJ	MOLF/EiJ	NOD/ShiLtJ	NZW/LacJ	PWD/PhJ	WSB/EiJ
rs36610337					SNP	A	A	A	A	A	A	A	A	A	A	A	A	T	A

Additional submitted assays for this SNP, where the strain of origin for observed alleles is not specified by the submitter

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	Alleles
ss50975078	NES13920825	PERLEGEN	MM_PANEL	f	SNP	A/T

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr3:68313732 () rs orientation: forward

Symbol	Name	Function Class
Gm10723	predicted gene 10723	1384 bp upstream
Iqschfp	Iqcj and Schip1 fusion protein	within coordinates
Schip1	schwannomin interacting protein 1	within coordinates