CCTTCCTTTC CAGACACCAT ATCGAGATGA CCAGTTGACT GCATGTCAGC ATTCATGTGT CTCTGTTTCT GTGTCTTATA TGCACCCTCA TTTTCAATGA ATGCACACTG ACTATGGCTC TTTGGATGAC TGGGAGATGC CTCTCCCAGT ATCTTCCTGT TCCTGGTCAC TCCTGGCTTC TGAAGCTCCT GACCAGACCC W TTGCTGCACA GTGAGAGGAA AGGAAACCAA GTGAGTCTAG CCCTGTGGAA GCAGCACTGG CTGCTGTTCA CACTAACAGG TGAATGGGAA ACTCATCTAT TGGCTCCTCG GGTGTGAGGT CCTGAGCCAG AAGCTTTTAG CACTCCCCTT GGTCTCTCTA GAAGAGCACT CTCAGGAGTA CCCAGAAATC AGTACTCAGG W = A/T Note: Sequence in lower case indicates low-complexity or repetitive sequence |
Assay ID | Submitter SNP ID |
Submitter Handle |
Population | ss orientation |
Variation Type | 129S1/SvImJ |
A/J |
AKR/J |
BALB/cByJ |
BTBR T<+> Itpr3 |
C3H/HeJ |
CAST/EiJ |
DBA/2J |
FVB/NJ |
KK/HlJ |
MOLF/EiJ |
NOD/ShiLtJ |
NZW/LacJ |
PWD/PhJ |
WSB/EiJ |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
ss51756586 | NES14801153 | PERLEGEN | MM_PANEL2 | f | SNP | A | A | A | A | A | A | T | A | A | A | A | A | A | T | A |
SNP Consensus Information | ||||||||||||||||||||
SNP | Consensus Type | 129S1/SvImJ |
A/J |
AKR/J |
BALB/cByJ |
BTBR T<+> Itpr3 |
C3H/HeJ |
CAST/EiJ |
DBA/2J |
FVB/NJ |
KK/HlJ |
MOLF/EiJ |
NOD/ShiLtJ |
NZW/LacJ |
PWD/PhJ |
WSB/EiJ |
||||
rs36611344 | SNP | A | A | A | A | A | A | T | A | A | A | A | A | A | T | A |
Assay ID | Submitter SNP ID |
Submitter Handle |
Population | ss orientation |
Variation Type |
Alleles |
---|---|---|---|---|---|---|
ss51756586 | NES14801153 | PERLEGEN | MM_PANEL | f | SNP | A/T |
Location: Chr6:86054549 () rs orientation: forward | ||||||||
Symbol | Name | Transcript | Protein | Function Class |
Allele | Residue | Codon Position |
AA Position |
---|---|---|---|---|---|---|---|---|
Add2 | adducin 2 | Intron | ||||||
Rr633328 | regulatory region 633328 | 730 bp distal | ||||||
Rr633329 | regulatory region 633329 | within coordinates | ||||||
Rr633330 | regulatory region 633330 | 528 bp proximal | ||||||
Rr633331 | regulatory region 633331 | 1844 bp proximal | ||||||
Tssr57448 | transcription start site region 57448 | 470 bp upstream | ||||||
Tssr57449 | transcription start site region 57449 | 503 bp upstream |
Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Models of Human Cancer database (MMHCdb) (formerly Mouse Tumor Biology (MTB)), Gene Ontology (GO) |
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last database update 03/18/2025 MGI 6.24 |
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