rs36622352 SNP Detail

Summary

• ID
  rs36622352
• Variation Type
  SNP
• Alleles
  A/G

• Created in dbSNP Build
  126
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr6:25112596 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                              TCAAATTACA TAATGTATAC
  TTGCCAGATA GCTGTAGAGA TGTGGAAATA ATATCCATAC ACAGGTTATA AAGGACTTGT
  AGAAGCTAGT TTGACGGAAG GCAAGAGGCT TCTGGTGGGG GTGGTCACTT GTTAGTAGCA
  TATTGAATAA CTTTGAGGAA GTCAATTTTC CTGTGTGAAA CTCAGGTTTC TCTATATGCA
  R
  GTTATAGATG TCAATGATAT TGAAGTTATG AAGGGCTCTA GTTCAAACTA TTTTTAGATT
  TTAATTAAAA TATAATTACA TCACCTTTCC TCTTTTCTTT CCCCTTGTAC CTCTTCTTCT
  TTCAACCTGC CTCATGTTCT TCCCTCACCC TCTAAAATTG AGGCTCTCCT TTTCTTTGAT
  GATAATTGTT ACATGTACAT                                            
  
  R = A/G
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	A/J	AKR/J	CAST/EiJ	MOLF/EiJ	WSB/EiJ
ss51566214	NES14861520	PERLEGEN	MM_PANEL2	f	SNP	A	A	A	G	A
SNP Consensus Information
SNP					Consensus Type	A/J	AKR/J	CAST/EiJ	MOLF/EiJ	WSB/EiJ
rs36622352					SNP	A	A	A	G	A

Additional submitted assays for this SNP, where the strain of origin for observed alleles is not specified by the submitter

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	Alleles
ss51566214	NES14861520	PERLEGEN	MM_PANEL	f	SNP	A/G

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr6:25112596 () rs orientation: forward

Symbol	Name	Function Class
Rr379084	regulatory region 379084	193 bp downstream