rs36628292 SNP Detail

Summary

• ID
  rs36628292
• Variation Type
  SNP
• Alleles
  C/G

• Created in dbSNP Build
  126
• Last Updated in dbSNP Build
  126
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr9:62319703 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                        TTAAGTCCAT TATGGTCATG GTGGGAAACA TGGCAGTGTG
  CAGGCAGACA TGGTGCTTGG GAGTAACTGA GAGTTTTATG CCTGGATTAG CAGTATAAAG
  S
  ATAAACTGGG CCTGGTTTGA GCATCTGAAA CCTCAAAGCC CACGCCTAGC GACACACTTC
  CTCTAACAAA GCCACACCCA TTCCAACAAG GCCATATGTC                      
  
  S = C/G
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	AKR/J	BALB/cByJ	CAST/EiJ
ss50718971	NES14253107	PERLEGEN	MM_PANEL2	f	SNP	G	G	C
SNP Consensus Information
SNP					Consensus Type	AKR/J	BALB/cByJ	CAST/EiJ
rs36628292					SNP	G	G	C

Additional submitted assays for this SNP, where the strain of origin for observed alleles is not specified by the submitter

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	Alleles
ss50718971	NES14253107	PERLEGEN	MM_PANEL	f	SNP	C/G

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr9:62319703 () rs orientation: forward

Symbol	Name	Function Class
Gm40523	predicted gene, 40523	1916 bp downstream
Rr196313	regulatory region 196313	898 bp proximal
Rr196314	regulatory region 196314	1498 bp proximal
Rr201157	regulatory region 201157	within coordinates