rs36629751 SNP Detail

Summary

• ID
  rs36629751
• Variation Type
  SNP
• Alleles
  A/G

• Created in dbSNP Build
  126
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr19:15782190 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                              ATTGCCCTTG GCATACTAAG
  GCTGCACACT GAAGGACCCT CACCTACCAT CCTTTCCATG ACTGATGCAC ACACAGAGAG
  AAGAGAGCTG GCTTGCACGT GCTCACACTC CCTTCTCTGA GATTGCTCCT TCTTCCCTGC
  GTGAAGCGCA TTCACTCATC TTGTGTCCTG CAGCTTTAAC CTGGTTAAGA GCCCACAGCC
  R
  CAAGCTATCC ATTTTCCCCC TGGTGAATGA TGATTCTCCT CCCCAGGGAC GTTAACGCCC
  TTGACAGGAG CTTCCTGGAA GCTCCTTAAA GCCAAGAGGC TGTGAATCAG CATAACCATC
  ACCTCTCTGG GAGAGCCTCA AGGATGCACT TAACCTCCAC CTCCATGGAT GGGGAAGAAG
  GCTGGGAAAA GAAGTCAGAG                                            
  
  R = A/G
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129S1/SvImJ	A/J	AKR/J	BALB/cByJ	BTBR T<+> Itpr3/J	C3H/HeJ	DBA/2J	KK/HlJ	MOLF/EiJ	NOD/ShiLtJ	NZW/LacJ	PWD/PhJ	WSB/EiJ
ss50640774	NES13617898	PERLEGEN	MM_PANEL2	f	SNP	G	G	G	G	G	G	G	G	A	G	G	A	G
SNP Consensus Information
SNP					Consensus Type	129S1/SvImJ	A/J	AKR/J	BALB/cByJ	BTBR T<+> Itpr3/J	C3H/HeJ	DBA/2J	KK/HlJ	MOLF/EiJ	NOD/ShiLtJ	NZW/LacJ	PWD/PhJ	WSB/EiJ
rs36629751					SNP	G	G	G	G	G	G	G	G	A	G	G	A	G

Additional submitted assays for this SNP, where the strain of origin for observed alleles is not specified by the submitter

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	Alleles
ss50640774	NES13617898	PERLEGEN	MM_PANEL	f	SNP	A/G

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr19:15782190 () rs orientation: forward

Symbol	Name	Function Class
Gm50348	predicted gene, 50348	within coordinates
Rr406864	regulatory region 406864	158 bp distal
Rr544633	regulatory region 544633	1758 bp distal
Rr544634	regulatory region 544634	942 bp distal