rs3663028 SNP Detail

Summary

• ID
  rs3663028
• Variation Type
  SNP
• Alleles
  C/T

• Created in dbSNP Build
  107
• Last Updated in dbSNP Build
  138
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr10:8994050 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                        GCTTG CTATTTTAGA GACAGCGCAA
  Y
  AGGGGAGCCA GATCTTATCT GTGAC                                      
  
  Y = C/T
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	C3H/HeJ	C57BL/6J	DBA/2J	LG/J	SM/J
ss5038963	WI_WGS_10_8951601	WI	MOUSE	f	SNP	T	C
ss146771078	ENSMUSSNP4425518	ENSEMBL	ENSEMBL_Sanger	f	SNP			C
ss323246695	CHEV_10_8838104	CHEVERUD	SCREENING_POP	f	SNP				T	T
SNP Consensus Information
SNP					Consensus Type	C3H/HeJ	C57BL/6J	DBA/2J	LG/J	SM/J
rs3663028					SNP	T	C	C	T	T

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr10:8994050 () rs orientation: forward

Symbol	Name	Function Class
Gm67478	predicted gene, 67478	1641 bp upstream
Rr427457	regulatory region 427457	within coordinates