rs3663302 SNP Detail

Summary

• ID
  rs3663302
• Variation Type
  SNP
• Alleles
  C/T

• Created in dbSNP Build
  107
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr8:73813459 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                              ATGGGAGGAG AGGTCCTTGG
  TTTTATGCAG GCTCTAGAGA TGAGCCTGTG TAGAGGAATC AAGGACAGGA AGGTTGGAGT
  GGGTGGGTAG TTTGAGGATC AACCTCATAG AAAGAGGGGG AGGGAGGATG GGGTAGGGGC
  ATTCCAGGAG CCAGGGAACT GGGAAAGAGG ATAACATTTG AAATGTAAAT AAAAAAATAT
  Y
  CAATAAAAAA ACACTAGCTC AAAAAACAAA GCAAAACAAA ATAATTGATA CAAATATAAT
  TAAATTGAAT ATACTATAAA AGTTATCTCA TTTGTCTCAC ATGTATACTT GTATTCTCTG
  GATATGTACC CATTTCCTTC CCTTTCTCAG AATTCTCTAA CTGGTTATCC TAGGCTAGCC
  TTAAACTTAC AAGCCTCCTG                                            
  
  Y = C/T
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129X1/SvJ	BALB/cByJ	C57BL/6J	DBA/2J
ss5039237	WI_WGS_8_72618604	WI	MOUSE	f	SNP		C	T
ss145180108	ENSMUSSNP3638106	ENSEMBL	ENSEMBL_Sanger	f	SNP	C			C
SNP Consensus Information
SNP					Consensus Type	129X1/SvJ	BALB/cByJ	C57BL/6J	DBA/2J
rs3663302					SNP	C	C	T	C

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr8:73813459 () rs orientation: forward

Symbol	Name	Function Class
B930093H17Rik	RIKEN cDNA B930093H17 gene	1126 bp downstream
Large1	LARGE xylosyl- and glucuronyltransferase 1	within coordinates