rs3663416 SNP Detail

Summary

• ID
  rs3663416
• Variation Type
  SNP
• Alleles
  A/G

• Created in dbSNP Build
  107
• Last Updated in dbSNP Build
  138
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr8:73813509 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                        AACAA AGCAAAACAA AATAATTGAT
  R
  CAAATATAAT TAAATTGAAT ATACT                                      
  
  R = A/G
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129X1/SvJ	BALB/cByJ	C57BL/6J	DBA/2J	LG/J	SM/J
ss5039351	WI_WGS_8_72618654	WI	MOUSE	f	SNP		G	A
ss145180121	ENSMUSSNP199356	ENSEMBL	ENSEMBL_Sanger	f	SNP	G			G
ss322710228	CHEV_8_75610780	CHEVERUD	SCREENING_POP	f	SNP					A	G
SNP Consensus Information
SNP					Consensus Type	129X1/SvJ	BALB/cByJ	C57BL/6J	DBA/2J	LG/J	SM/J
rs3663416					SNP	G	G	A	G	A	G

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr8:73813509 () rs orientation: forward

Symbol	Name	Function Class
B930093H17Rik	RIKEN cDNA B930093H17 gene	1076 bp downstream
Large1	LARGE xylosyl- and glucuronyltransferase 1	within coordinates