rs36640917 SNP Detail

Summary

• ID
  rs36640917
• Variation Type
  SNP
• Alleles
  A/G

• Created in dbSNP Build
  126
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr3:75830617 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                        ATAGAGTTAA GAGGTCATTA AATGATGATT TTCAAATAGT
  CAAAGACAAT GACGATGGCC AGAGCCAAGA GCTACCTGAT GCTGATCAGT TCTGAGCACA
  R
  AGCTAAGAAA TCTTACTTTT ACATGTCTGT TTTCTATGGG ATAAAATTAA GTAGGTAGAA
  AGCTGCGTCA ACAACATCTT CCCAATTGTA AAGTTTGAA                       
  
  R = A/G
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129X1/SvJ	A/J	AKR/J	BALB/cByJ	BTBR T<+> Itpr3/J	C3H/HeJ	CAST/EiJ	DBA/2J	FVB/NJ	KK/HlJ	NOD/ShiLtJ	NZW/LacJ	WSB/EiJ
ss51553925	NES14683544	PERLEGEN	MM_PANEL2	f	SNP		A	A	G	G	G	G	A	G	G	G	A	G
ss135332029	ENSMUSSNP6839350	ENSEMBL	ENSEMBL_Sanger	f	SNP	A							A
SNP Consensus Information
SNP					Consensus Type	129X1/SvJ	A/J	AKR/J	BALB/cByJ	BTBR T<+> Itpr3/J	C3H/HeJ	CAST/EiJ	DBA/2J	FVB/NJ	KK/HlJ	NOD/ShiLtJ	NZW/LacJ	WSB/EiJ
rs36640917					SNP	A	A	A	G	G	G	G	A	G	G	G	A	G

Additional submitted assays for this SNP, where the strain of origin for observed alleles is not specified by the submitter

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	Alleles
ss51553925	NES14683544	PERLEGEN	MM_PANEL	f	SNP	A/G

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr3:75830617 () rs orientation: forward

Symbol	Name	Function Class
Golim4	golgi integral membrane protein 4	within coordinates
Rr72842	regulatory region 72842	817 bp distal
Rr81458	regulatory region 81458	1385 bp proximal