rs36647922 SNP Detail

Summary

• ID
  rs36647922
• Variation Type
  SNP
• Alleles
  A/G

• Created in dbSNP Build
  126
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr9:66104242 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                              GCCAGCCCTT CCCCAAGTAG
  GCGCCAAGTC AGAGTTGTAT GAAACATGAA GCCGGGTGGG AAAGGAGAGT GAACTAGGCT
  GTCTGACAGT GGTGGGGGGT GGGGTGGGAG GCTGCTTTGG TCCTAGATCT GCCGCTGCCT
  GGGCAAGAGG CAAGTTCTTC ACTTTACCCA CACCTCAGTT TCCCCAGCTG TGAATGGAGG
  R
  TGATGTTGAA AAATTCCCTT TATTCCTGTG GTTTACAAAC CTTGTGTCGT GGGGGATTTT
  AGGTGACAAC TCTTGGTTGG CTCTGCCGTG CTCTGTAGAC ATGAGGCAGG CTGATTACTT
  TTCTAGAGGC ATTTAGTTTT CATGTGCATT GGTGTTTAGC CTCCGTGTAT GTCTGTATGA
  AAGTGTTGAA TCCCTTGGAT                                            
  
  R = A/G
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129S1/SvImJ	A/J	AKR/J	BALB/cByJ	BTBR T<+> Itpr3/J	C3H/HeJ	CAST/EiJ	FVB/NJ	KK/HlJ	MOLF/EiJ	NOD/ShiLtJ	NZW/LacJ	PWD/PhJ	WSB/EiJ
ss50723399	NES14248091	PERLEGEN	MM_PANEL2	f	SNP	G	G	G	G	G	G	A	G	G	G	G	G	G	G
SNP Consensus Information
SNP					Consensus Type	129S1/SvImJ	A/J	AKR/J	BALB/cByJ	BTBR T<+> Itpr3/J	C3H/HeJ	CAST/EiJ	FVB/NJ	KK/HlJ	MOLF/EiJ	NOD/ShiLtJ	NZW/LacJ	PWD/PhJ	WSB/EiJ
rs36647922					SNP	G	G	G	G	G	G	A	G	G	G	G	G	G	G

Additional submitted assays for this SNP, where the strain of origin for observed alleles is not specified by the submitter

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	Alleles
ss50723399	NES14248091	PERLEGEN	MM_PANEL	f	SNP	A/G

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr9:66104242 () rs orientation: forward

Symbol	Name	Function Class
Dapk2	death-associated protein kinase 2	within coordinates
Rr210270	regulatory region 210270	1843 bp distal
Rr210271	regulatory region 210271	within coordinates