rs36648804 SNP Detail

Summary

• ID
  rs36648804
• Variation Type
  SNP
• Alleles
  A/G

• Created in dbSNP Build
  126
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr19:42268398 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                              CTGTCCTGTT AACTAGCCCT
  AGCTGCCTGC CTCCTTCTTC CTCCTTCCAG GATGTTCCTG TTGCCAAGGA AACACAACCT
  CAGCCCTTGG CAGGTTTCTG ACTCCCTGTG GCTTGGCTAC TGAGCTTACA AAAGGAATGA
  GACAGCGGTG ACCATGGGCA GAGAGGTAAG GGGAGGGATT TGACTGTCCT CCTGAAGTTG
  R
  AGTCTGGAAT CTCTGGAACC CTGAGATGAT GAAATGATGA AATGTTCTCT GTCTCCATGT
  TCCTCTAACA GAGGCTGTGT TGGAGTTCTT GCTTGGTCCA GCCTTCTTGG TAGGGATGTG
  ATGCCCAAGC CCTGGGAGGG GGCCATAGCA GCCAGAGTGA CTCATATTCA GACTCTTGGC
  CCTCGGAATG GCACCTTCCC                                            
  
  R = A/G
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129S1/SvImJ	A/J	AKR/J	BALB/cByJ	C3H/HeJ	CAST/EiJ	DBA/2J	FVB/NJ	KK/HlJ	MOLF/EiJ	NOD/ShiLtJ	NZW/LacJ	PWD/PhJ	WSB/EiJ
ss50818819	NES13546202	PERLEGEN	MM_PANEL2	f	SNP	G	G	G	G	G	A	G	G	G	G	G	G	G	G
SNP Consensus Information
SNP					Consensus Type	129S1/SvImJ	A/J	AKR/J	BALB/cByJ	C3H/HeJ	CAST/EiJ	DBA/2J	FVB/NJ	KK/HlJ	MOLF/EiJ	NOD/ShiLtJ	NZW/LacJ	PWD/PhJ	WSB/EiJ
rs36648804					SNP	G	G	G	G	G	A	G	G	G	G	G	G	G	G

Additional submitted assays for this SNP, where the strain of origin for observed alleles is not specified by the submitter

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	Alleles
ss50818819	NES13546202	PERLEGEN	MM_PANEL	f	SNP	A/G

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr19:42268398 () rs orientation: forward

Symbol	Name	Function Class
Gm34347	predicted gene, 34347	within coordinates
Mir3085	microRNA 3085	123 bp downstream