rs36648865 SNP Detail

Summary

• ID
  rs36648865
• Variation Type
  SNP
• Alleles
  C/G

• Created in dbSNP Build
  126
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr16:28091861 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                              CCTCAAAACC AAGAAGATAT
  TTCATAATGG GAATTCTGAG CAGTATCACT GAGGTCCAAA CAAAAGCAAA CCAGAGAAGT
  TTTAACTTAA TCCAAGGCAA GAATTTTTCA TTGCAGGACA ATGAAATAGC CTGGCTTAAG
  AACAAAATGG CATCACGATC CCTAATTGAC AGAGGAAAGG AAATGTGTCT TCCTAGTTAT
  S
  TTCTTCTAAG TAGAATTAAT GGCTATGGTA GGTGCTCCCT ACTGCCAAGT ATTTCAACAA
  ATTATCACCG TGTTCAAATA ATACAAGAAT CACCTTCATT CGAGCAAACT GTGATGGGAT
  AGAAATTAAA AATAATTTAG CATATTACTT AATTCATGAG ACACCTATCT CTGTGAAATT
  TAAAAAAAAA AAGAAAGAAA                                            
  
  S = C/G
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129S1/SvImJ	A/J	AKR/J	BALB/cByJ	BTBR T<+> Itpr3/J	C3H/HeJ	FVB/NJ	KK/HlJ	LG/J	MOLF/EiJ	NOD/ShiLtJ	NZW/LacJ	SM/J	WSB/EiJ
ss51805161	NES14533798	PERLEGEN	MM_PANEL2	f	SNP	C	C	C	C	C	C	C	C		C	C	C		G
ss325123272	CHEV_16_28273195	CHEVERUD	SCREENING_POP	f	SNP									C				G
SNP Consensus Information
SNP					Consensus Type	129S1/SvImJ	A/J	AKR/J	BALB/cByJ	BTBR T<+> Itpr3/J	C3H/HeJ	FVB/NJ	KK/HlJ	LG/J	MOLF/EiJ	NOD/ShiLtJ	NZW/LacJ	SM/J	WSB/EiJ
rs36648865					SNP	C	C	C	C	C	C	C	C	C	C	C	C	G	G

Additional submitted assays for this SNP, where the strain of origin for observed alleles is not specified by the submitter

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	Alleles
ss51805161	NES14533798	PERLEGEN	MM_PANEL	f	SNP	C/G

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr16:28091861 () rs orientation: forward

Symbol	Name	Function Class
Fgf12	fibroblast growth factor 12	within coordinates
Tssr140647	transcription start site region 140647	1199 bp downstream