rs36649522 SNP Detail

Summary

• ID
  rs36649522
• Variation Type
  SNP
• Alleles
  A/C

• Created in dbSNP Build
  126
• Last Updated in dbSNP Build
  142
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr19:21463861 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                        GCATG TGTTTGAGGA AAATCAGTAT
  M
  TCTCTCCCTC TCCTTCTTTC CTTCC                                      
  
  M = A/C
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129X1/SvJ	A/J	AKR/J	BALB/cByJ	C3H/HeJ	DBA/2J	FVB/NJ	LG/J	PWD/PhJ	SM/J
ss50694721	NES13605268	PERLEGEN	MM_PANEL2	f	SNP		A	A	A	C	C	A		C
ss146180674	ENSMUSSNP6367880	ENSEMBL	ENSEMBL_Sanger	f	SNP	A	A				C
ss325751666	CHEV_19_21560987	CHEVERUD	SCREENING_POP	f	SNP								C		A
SNP Consensus Information
SNP					Consensus Type	129X1/SvJ	A/J	AKR/J	BALB/cByJ	C3H/HeJ	DBA/2J	FVB/NJ	LG/J	PWD/PhJ	SM/J
rs36649522					SNP	A	A	A	A	C	C	A	C	C	A

Additional submitted assays for this SNP, where the strain of origin for observed alleles is not specified by the submitter

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	Alleles
ss50694721	NES13605268	PERLEGEN	MM_PANEL	f	SNP	A/C

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr19:21463861 () rs orientation: forward

Symbol	Name	Function Class
2010105D22Rik	RIKEN cDNA 2010105D22 gene	1435 bp upstream
Gm59126	predicted gene, 59126	within coordinates
Rr361557	regulatory region 361557	1596 bp proximal