rs36652612 SNP Detail

Summary

• ID
  rs36652612
• Variation Type
  SNP
• Alleles
  A/C

• Created in dbSNP Build
  126
• Last Updated in dbSNP Build
  142
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr7:28166936 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                        GACGG GCGCACGGGC ACCGGGACGC
  M
  TGTGGGCCGC ACTTAGTTGC CCAGC                                      
  
  M = A/C
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129S1/SvImJ	CAST/EiJ	FVB/NJ	MOLF/EiJ	PWD/PhJ
ss51887028	NES14904576	PERLEGEN	MM_PANEL2	f	SNP	C	A	C	C	C
SNP Consensus Information
SNP					Consensus Type	129S1/SvImJ	CAST/EiJ	FVB/NJ	MOLF/EiJ	PWD/PhJ
rs36652612					SNP	C	A	C	C	C

Additional submitted assays for this SNP, where the strain of origin for observed alleles is not specified by the submitter

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	Alleles
ss51887028	NES14904576	PERLEGEN	MM_PANEL	f	SNP	A/C

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr7:28166936 () rs orientation: forward

Symbol	Name	Function Class
Cpgi18706	CpG island 18706	within coordinates
Lrfn1	leucine rich repeat and fibronectin type III domain containing 1	within coordinates
Rr644283	regulatory region 644283	506 bp distal
Rr644284	regulatory region 644284	389 bp distal
Tssr65486	transcription start site region 65486	388 bp upstream