rs36652696 SNP Detail

Summary

• ID
  rs36652696
• Variation Type
  SNP
• Alleles
  G/T

• Created in dbSNP Build
  126
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr9:35747042 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                              AAAAATCATA TTTTTAGTGG
  CTTAAAATAT ATGAGTATTT TTAAAAGTAA CCTAAGGAAG GAAAGGAAAA ACTGCTATAG
  TGAAAATCTT GCAGTACTGA AGAAAGAGAG TGAAAGACTC TAAAAGGTAG AGTGGTCACA
  TGTGTGCATC AAGGGAAGCA GTCATCAAAG TACAGAGAGC ACATAGGCTG AAAAGTCTTT
  K
  ACACATAAAA TCAACCATGG GGTAAACATT AAATATCAAA AGTAATTCCC TTGAATGGGC
  TAGCAAATCG AACAGTTATT TCTCACAGGC AAAAATTATG AGGTCCAATA GATTTTGAAA
  AATTGTTCAA AATTTTTAGC CACTAGAGAA ATGCAAAATA AACCTGCTTT GAGATTCTGT
  TTCACCACAG TCAGAATGCC                                            
  
  K = G/T
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129S1/SvImJ	A/J	AKR/J	BALB/cByJ	BTBR T<+> Itpr3/J	C3H/HeJ	CAST/EiJ	DBA/2J	FVB/NJ	KK/HlJ	LG/J	MOLF/EiJ	NOD/ShiLtJ	NZW/LacJ	PWD/PhJ	SM/J	WSB/EiJ
ss50672083	NES14009005	PERLEGEN	MM_PANEL2	f	SNP	G	G	G	G	G	G	G	G	G	G		G	G	G	G		T
ss322901338	CHEV_9_35643331	CHEVERUD	SCREENING_POP	f	SNP											T					G
SNP Consensus Information
SNP					Consensus Type	129S1/SvImJ	A/J	AKR/J	BALB/cByJ	BTBR T<+> Itpr3/J	C3H/HeJ	CAST/EiJ	DBA/2J	FVB/NJ	KK/HlJ	LG/J	MOLF/EiJ	NOD/ShiLtJ	NZW/LacJ	PWD/PhJ	SM/J	WSB/EiJ
rs36652696					SNP	G	G	G	G	G	G	G	G	G	G	T	G	G	G	G	G	T

Additional submitted assays for this SNP, where the strain of origin for observed alleles is not specified by the submitter

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	Alleles
ss50672083	NES14009005	PERLEGEN	MM_PANEL	f	SNP	G/T

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr9:35747042 () rs orientation: forward

Symbol	Name	Function Class
Gm36974	predicted gene, 36974	within coordinates