rs36654378 SNP Detail

Summary

• ID
  rs36654378
• Variation Type
  SNP
• Alleles
  A/G

• Created in dbSNP Build
  126
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr9:66118627 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                        ATTCTGTATG GACTAGTCTG TAAACTCTAA GGGAACTTTG
  AGTGAGGGCT GAGCTAAGTT TTCAATGAAA ATATCTCCCT ATATAGTCAA GTCTAATGTG
  R
  ACTGGGCCTA TTTTATTTTA GGACTTGTGT CTGTGCCTCT CCCCTCACTC CCCCATCCAC
  CCCCCAACTC ACCCACCCCC CGTTCATTTG ACAGCAGCG                       
  
  R = A/G
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129S1/SvImJ	A/J	AKR/J	BALB/cByJ	BTBR T<+> Itpr3/J	C3H/HeJ	CAST/EiJ	DBA/2J	FVB/NJ	KK/HlJ	MOLF/EiJ	NOD/ShiLtJ	NZW/LacJ	PWD/PhJ	WSB/EiJ
ss50723215	NES14247821	PERLEGEN	MM_PANEL2	f	SNP	G	A	A	A	G	A	G	A	G	G	G	G	G	G	G
ss136573614	ENSMUSSNP4534374	ENSEMBL	ENSEMBL_Sanger	f	SNP		A						A
SNP Consensus Information
SNP					Consensus Type	129S1/SvImJ	A/J	AKR/J	BALB/cByJ	BTBR T<+> Itpr3/J	C3H/HeJ	CAST/EiJ	DBA/2J	FVB/NJ	KK/HlJ	MOLF/EiJ	NOD/ShiLtJ	NZW/LacJ	PWD/PhJ	WSB/EiJ
rs36654378					SNP	G	A	A	A	G	A	G	A	G	G	G	G	G	G	G

Additional submitted assays for this SNP, where the strain of origin for observed alleles is not specified by the submitter

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	Alleles
ss50723215	NES14247821	PERLEGEN	MM_PANEL	f	SNP	A/G

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr9:66118627 () rs orientation: forward

Symbol	Name	Function Class
Dapk2	death-associated protein kinase 2	within coordinates
Rr401473	regulatory region 401473	784 bp upstream
Rr681677	regulatory region 681677	99 bp proximal
Rr681678	regulatory region 681678	837 bp proximal
Rr681679	regulatory region 681679	1359 bp proximal