rs36658283 SNP Detail

Summary

• ID
  rs36658283
• Variation Type
  SNP
• Alleles
  A/T

• Created in dbSNP Build
  126
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr6:113094274 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                              AAAGAAAAAT AAAAAGCAGT
  AGGGAGAAAG AATTAGTCGA GGTTTGTGTT CTTCCTGATT CTGTGCTGCA TAGGTTAGAG
  GTAGACATAT ACAGAAAAAC TGAAATTTTG AAAGTATTAT ACCAATTCTA ATTTATTTAA
  CAATAACATC AGAGGAAATT TTTATACCAG TTTTTCAATA AGGCGAATAG TTAGTATGCC
  W
  TAATATTCTG TTTACAAGAA TACTGAGATA CTTATGGTTG TTTCTTTGGC ACAGTAATTA
  CAAAGTGGAC TGTGCTTGTC ACAAGGGAAA CCGGAATTGC CCTATACAGA AAAGAAATCC
  CAATGCTGCA GAATTGCCAC TCCCACCTCC TCCTAGCTTT CCCACCATTG GAGCAGAGAC
  CAGACGTAGA AAAGCACGGC                                            
  
  W = A/T
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129S1/SvImJ	A/J	AKR/J	BALB/cByJ	BTBR T<+> Itpr3/J	C3H/HeJ	CAST/EiJ	DBA/2J	FVB/NJ	KK/HlJ	MOLF/EiJ	NOD/ShiLtJ	NZW/LacJ	PWD/PhJ	WSB/EiJ
ss51843670	NES14765264	PERLEGEN	MM_PANEL2	f	SNP	A	A	A	A	A	A	T	A	A	A	T	A	A	A	A
SNP Consensus Information
SNP					Consensus Type	129S1/SvImJ	A/J	AKR/J	BALB/cByJ	BTBR T<+> Itpr3/J	C3H/HeJ	CAST/EiJ	DBA/2J	FVB/NJ	KK/HlJ	MOLF/EiJ	NOD/ShiLtJ	NZW/LacJ	PWD/PhJ	WSB/EiJ
rs36658283					SNP	A	A	A	A	A	A	T	A	A	A	T	A	A	A	A

Additional submitted assays for this SNP, where the strain of origin for observed alleles is not specified by the submitter

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	Alleles
ss51843670	NES14765264	PERLEGEN	MM_PANEL	f	SNP	A/T

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr6:113094274 () rs orientation: forward

Symbol	Name	Function Class
Setd5	SET domain containing 5	within coordinates