rs36659019 SNP Detail

Summary

• ID
  rs36659019
• Variation Type
  SNP
• Alleles
  A/G

• Created in dbSNP Build
  126
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr13:34565040 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                              GTGCACTGGT CAATTTTTGG
  TAGATAACAG CTTTTCTAAA TTTGATTTCC TCATGTCCAA AATGGGACCA TTTCAACCGC
  CCCTGAGGGC TACCTAGGGA ATATTGGAAC GGCTTGACTA ATGTACAGCT TTCCTCACTT
  CCCTCTCCTT CCTTCACAAC TATGCAGGAG ATGGGAACGA TTCCTAGGAG AGAGGCACCA
  R
  TCAGGATGAA GTCTAAGCAT ACAGAGCTCC TCGAGCTGTG CAGGATCAGA TCTTGATCTT
  GGACTTCTCA GACTGGAGAA CTGTGAGGAA TTGTATAGCA GCCTCTTGGG AGCACTCACA
  CACCTGGGAC TTGTTACAAA TGCACATCAT TGGTCTGGTC CAGACCCGCT AGGGTGGCCT
  GAAGAATGAG GTTAACAAGC                                            
  
  R = A/G
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129S1/SvImJ	A/J	AKR/J	BALB/cByJ	BTBR T<+> Itpr3/J	C3H/HeJ	CAST/EiJ	DBA/2J	FVB/NJ	KK/HlJ	NOD/ShiLtJ	NZW/LacJ	WSB/EiJ
ss51080089	NES14355298	PERLEGEN	MM_PANEL2	f	SNP	A	A	A	A	A	A	G	A	A	A	A	A	G
SNP Consensus Information
SNP					Consensus Type	129S1/SvImJ	A/J	AKR/J	BALB/cByJ	BTBR T<+> Itpr3/J	C3H/HeJ	CAST/EiJ	DBA/2J	FVB/NJ	KK/HlJ	NOD/ShiLtJ	NZW/LacJ	WSB/EiJ
rs36659019					SNP	A	A	A	A	A	A	G	A	A	A	A	A	G

Additional submitted assays for this SNP, where the strain of origin for observed alleles is not specified by the submitter

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	Alleles
ss51080089	NES14355298	PERLEGEN	MM_PANEL	f	SNP	A/G

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr13:34565040 () rs orientation: forward

Symbol	Name	Function Class
Rr275700	regulatory region 275700	1961 bp proximal
Rr278954	regulatory region 278954	1761 bp distal