rs36660350 SNP Detail

Summary

• ID
  rs36660350
• Variation Type
  SNP
• Alleles
  A/G

• Created in dbSNP Build
  126
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr9:70313646 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                              GGGATGACTG TGGACCTCTC
  CCTGTTAAGA TCCACCCTGT GATTGCTGTC TGTTACAGTT GCTACTTGCA CATCTGTGAA
  GCCTTGGCCT TATGGCTGCA GAGAGAACTG TAGTAGCGAA GATAAATGAG ATTAGTCAGT
  CCCTCTTGGA AAGATGGTAG AACAGTTGCC AAGTAGCCTC AGCATGAATG CAGGTCCATT
  R
  AGTGTCTGAA ACCTTGCTGG CCAGTCTTAA AGGACCCATG AATTGTAAGT AAACCTGTTT
  TAGTTGGTGA CACTAGACTC AGGGACCCAT CACAGGTGTG AAGCTCCCCC AAAAGCCTCC
  AGCCTGCTCA TCCAGATAGA AATGTGATGG GCACCAGAGG CAAACGTGAG GGTGGGCCAA
  TCCTGCTTGC CAGTTGTGGT                                            
  
  R = A/G
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129S1/SvImJ	A/J	AKR/J	BALB/cByJ	BTBR T<+> Itpr3/J	C3H/HeJ	CAST/EiJ	DBA/2J	FVB/NJ	KK/HlJ	MOLF/EiJ	NOD/ShiLtJ	NZW/LacJ	PWD/PhJ
ss52027697	NES15045276	PERLEGEN	MM_PANEL2	f	SNP	A	A	A	A	A	A	G	A	A	A	A	A	A	A
SNP Consensus Information
SNP					Consensus Type	129S1/SvImJ	A/J	AKR/J	BALB/cByJ	BTBR T<+> Itpr3/J	C3H/HeJ	CAST/EiJ	DBA/2J	FVB/NJ	KK/HlJ	MOLF/EiJ	NOD/ShiLtJ	NZW/LacJ	PWD/PhJ
rs36660350					SNP	A	A	A	A	A	A	G	A	A	A	A	A	A	A

Additional submitted assays for this SNP, where the strain of origin for observed alleles is not specified by the submitter

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	Alleles
ss52027697	NES15045276	PERLEGEN	MM_PANEL	f	SNP	A/G

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr9:70313646 () rs orientation: forward

Symbol	Name	Function Class
Ccnb2	cyclin B2	1328 bp downstream
Gm69197	predicted gene, 69197	1306 bp downstream
Mir5626	microRNA 5626	611 bp upstream
Rr204787	regulatory region 204787	1069 bp proximal