rs36668248 SNP Detail

Summary

• ID
  rs36668248
• Variation Type
  SNP
• Alleles
  A/G

• Created in dbSNP Build
  126
• Last Updated in dbSNP Build
  138
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr6:134808102 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                        CTTAC TTTTATGACT ATAAAATAGC
  R
  CTCCTTAACT CATAGATTTG TGGTT                                      
  
  R = A/G
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	A/J	BALB/cByJ	BTBR T<+> Itpr3/J	DBA/2J	LG/J	MOLF/EiJ	NZW/LacJ	PWD/PhJ	SM/J
ss51438859	NES14009635	PERLEGEN	MM_PANEL2	f	SNP		G	A			G	G	A
ss133787610	ENSMUSSNP3019710	ENSEMBL	ENSEMBL_Sanger	f	SNP	G			G
ss321982541	CHEV_6_134781157	CHEVERUD	SCREENING_POP	f	SNP					G				A
SNP Consensus Information
SNP					Consensus Type	A/J	BALB/cByJ	BTBR T<+> Itpr3/J	DBA/2J	LG/J	MOLF/EiJ	NZW/LacJ	PWD/PhJ	SM/J
rs36668248					SNP	G	G	A	G	G	G	G	A	A

Additional submitted assays for this SNP, where the strain of origin for observed alleles is not specified by the submitter

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	Alleles
ss51438859	NES14009635	PERLEGEN	MM_PANEL	f	SNP	A/G

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr6:134808102 () rs orientation: forward

Symbol	Name	Function Class
Cpgi18077	CpG island 18077	496 bp distal
Crebl2	cAMP responsive element binding protein-like 2	within coordinates
Gm67917	predicted gene, 67917	1044 bp upstream
Rr368197	regulatory region 368197	875 bp downstream
Rr639728	regulatory region 639728	1055 bp distal
Rr639729	regulatory region 639729	874 bp distal
Rr639730	regulatory region 639730	within coordinates
Rr639731	regulatory region 639731	657 bp distal
Tssr59250	transcription start site region 59250	960 bp downstream
Tssr59251	transcription start site region 59251	869 bp downstream
Tssr59252	transcription start site region 59252	802 bp downstream
Tssr59253	transcription start site region 59253	365 bp downstream
Tssr59254	transcription start site region 59254	103 bp downstream