rs36668813 SNP Detail

Summary

• ID
  rs36668813
• Variation Type
  SNP
• Alleles
  A/T

• Created in dbSNP Build
  126
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr9:14014844 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                              TACTTTCCGT GGATCTCAGA
  CACACAAAGA TCCACATCAA CTCACCTCTG CCCGGGGGGT GGGGGGTGGG GTGGGGGGGG
  GAGGGGTTAA AGCATTACAG AGACAGCTGT AGAATGATTC GGGGTGAGCA ATGAGGAGTG
  AAAAGACCAT GAACCACTTT AACCTCTGCC TACCCAACCT CCGAGACAGG GACATTCAAA
  W
  GAGGACCATA TCCTGACAAA TACCTTTCTG GGAAATTTCA TAAACCAAAT CGAAAACCAA
  GCCATTTGGT GACAGGGACC CACACACAGC TGTCTGCATT TGTTAGTCCT GTGTTTTGAG
  GAAGCTGATG ACTGTGAGGG GATGAAGAAC TTAAGATCAA AGAGGAAAAG GAACCAGAGT
  CAACCAAGCA AAGAGGGCCC                                            
  
  W = A/T
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129S1/SvImJ	A/J	AKR/J	BALB/cByJ	BTBR T<+> Itpr3/J	C3H/HeJ	CAST/EiJ	DBA/2J	FVB/NJ	KK/HlJ	MOLF/EiJ	NOD/ShiLtJ	NZW/LacJ	WSB/EiJ
ss51988196	NES14998742	PERLEGEN	MM_PANEL2	f	SNP	A	A	A	A	A	A	A	A	A	A	T	A	A	A
SNP Consensus Information
SNP					Consensus Type	129S1/SvImJ	A/J	AKR/J	BALB/cByJ	BTBR T<+> Itpr3/J	C3H/HeJ	CAST/EiJ	DBA/2J	FVB/NJ	KK/HlJ	MOLF/EiJ	NOD/ShiLtJ	NZW/LacJ	WSB/EiJ
rs36668813					SNP	A	A	A	A	A	A	A	A	A	A	T	A	A	A

Additional submitted assays for this SNP, where the strain of origin for observed alleles is not specified by the submitter

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	Alleles
ss51988196	NES14998742	PERLEGEN	MM_PANEL	f	SNP	A/T

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr9:14014844 () rs orientation: forward

Symbol	Name	Function Class
1700019J19Rik	RIKEN cDNA 1700019J19 gene	within coordinates
Rr199406	regulatory region 199406	within coordinates