rs36669296 SNP Detail

Summary

• ID
  rs36669296
• Variation Type
  SNP
• Alleles
  C/T

• Created in dbSNP Build
  126
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr15:93205189 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                              ACAAGACATT ATCCTTGGTG
  TTTTGGAAAA GACGACGAGT GAGAGCATTG TCAATGTCAC TGCCCGTTTC CCCTTCCCTT
  GCATTCACAG AGTCGACTCC AGATTTATAA GCACGGAAAG GCAGCAGGGC CCAGTGAACC
  CGAAGCCAAA TGACTGACAT TCATTCAAGT CTCAGTTCTG AATCTCACCT CTGCTGCTCA
  Y
  TGTCGGTTAG AACAATGGTG TACTCCGAAT GGTGTAGCTT GCATATGGCT AAGGATGTCA
  GCAGCTAGCA TTTGAGAAGT GAAGGGTCAT CTTCAACTAC ACAGAATGAA GCCAAACGAG
  GCATGACGGG ACACGCTTTT AAACCTGCAC TCATCATCAG ACCTGTGGAT CCTGAACCAT
  ACAGGACACC ACTGATAGAG                                            
  
  Y = C/T
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129S1/SvImJ	A/J	AKR/J	BALB/cByJ	BTBR T<+> Itpr3/J	C3H/HeJ	CAST/EiJ	DBA/2J	FVB/NJ	KK/HlJ	MOLF/EiJ	NOD/ShiLtJ	NZW/LacJ	PWD/PhJ	WSB/EiJ
ss51751749	NES14555263	PERLEGEN	MM_PANEL2	f	SNP	C	C	C	C	C	C	T	C	C	C	C	C	C	C	C
SNP Consensus Information
SNP					Consensus Type	129S1/SvImJ	A/J	AKR/J	BALB/cByJ	BTBR T<+> Itpr3/J	C3H/HeJ	CAST/EiJ	DBA/2J	FVB/NJ	KK/HlJ	MOLF/EiJ	NOD/ShiLtJ	NZW/LacJ	PWD/PhJ	WSB/EiJ
rs36669296					SNP	C	C	C	C	C	C	T	C	C	C	C	C	C	C	C

Additional submitted assays for this SNP, where the strain of origin for observed alleles is not specified by the submitter

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	Alleles
ss51751749	NES14555263	PERLEGEN	MM_PANEL	f	SNP	C/T

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr15:93205189 () rs orientation: forward

Symbol	Name	Function Class
Gm52193	predicted gene, 52193	within coordinates
Yaf2	YY1 associated factor 2	within coordinates