rs36671694 SNP Detail

Summary

• ID
  rs36671694
• Variation Type
  SNP
• Alleles
  A/G

• Created in dbSNP Build
  126
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr1:34463665 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                              CCTGGGGAAA CCAACACTTT
  ACTTTTTAAA TCATTTACAA AACTATGATG ATAGATAAAA ACTTTTCCAA CAATAAATTT
  TCATATGGCT ACATGTGTGT CATCAGAGGT GGGTTTGGGT ATATGGCAAA AACAAAGCCT
  TAATTAGAAA GAATTAAAAT AGTTTAAATT TACACATTGA AGATTTATAA AAAATGAGGC
  R
  TTAGATGTTA AATAATAATT GACCATGGGG CTGGAGAGTT AGTTCAGCAG TTAAGAGCAC
  TGACCATTAA AGATTTATTA ACCTGCTCCT GGAAATATGC CACTAGCCTT GGACGACAGC
  CCCCACTGAA TACATCCTTT TAGAATTGTT ATATTTTGAT GATTGATAAT GATGTTACCT
  GTTCTGTTTG TGATTCACTG                                            
  
  R = A/G
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	A/J	AKR/J	BALB/cByJ	BTBR T<+> Itpr3/J	C3H/HeJ	CAST/EiJ	DBA/2J	FVB/NJ	KK/HlJ	MOLF/EiJ	NOD/ShiLtJ	NZW/LacJ	PWD/PhJ
ss51237547	NES14285916	PERLEGEN	MM_PANEL2	f	SNP	A	A	A	A	A	G	A	A	A	A	A	A	A
SNP Consensus Information
SNP					Consensus Type	A/J	AKR/J	BALB/cByJ	BTBR T<+> Itpr3/J	C3H/HeJ	CAST/EiJ	DBA/2J	FVB/NJ	KK/HlJ	MOLF/EiJ	NOD/ShiLtJ	NZW/LacJ	PWD/PhJ
rs36671694					SNP	A	A	A	A	A	G	A	A	A	A	A	A	A

Additional submitted assays for this SNP, where the strain of origin for observed alleles is not specified by the submitter

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	Alleles
ss51237547	NES14285916	PERLEGEN	MM_PANEL	f	SNP	A/G

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr1:34463665 () rs orientation: forward

Symbol	Name	Function Class
Gm37233	predicted gene, 37233	1434 bp downstream