rs36672817 SNP Detail

Summary

• ID
  rs36672817
• Variation Type
  SNP
• Alleles
  C/T

• Created in dbSNP Build
  126
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr7:51281820 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                              ACGAGTAAAG AGGCATTTAG
  TTCTTTTCCT CCCCACTCAT GCCCTTGTCT GTCTGGGCTC CTGGAAGACT GAAGAATGAC
  TGCAAGAAAT TTAGACCTTT TGTATGCAAA ACATAAAGAA TCCATCCTTG GGGTTCTAAT
  ATACCTCAAT TCCTTTTCCT AGTATAAAAT ATACAATAAT ATATACCTAA AACTGAAATA
  Y
  CCAAATCCAT GCTCTAAAAC TCTGTACTAA TGTGCATTTT TCTTTGTAAA AGTAAAAGAC
  TTTAGGTAAA GTTTTTGGCT TCACTGGTCA TAAAAAAAAT TGTTTGGTTA GTTTGATTTT
  TAGAAAGAGA AGAATGACAT TTTTAGCATT AACAACTTCA TGTTGTCTCA TATCTAGAAC
  TGAACAATTT GTTAGTTCTT                                            
  
  Y = C/T
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129S1/SvImJ	A/J	AKR/J	BALB/cByJ	BTBR T<+> Itpr3/J	C3H/HeJ	CAST/EiJ	DBA/2J	FVB/NJ	KK/HlJ	MOLF/EiJ	NOD/ShiLtJ	NZW/LacJ	PWD/PhJ	WSB/EiJ
ss51892390	NES14921489	PERLEGEN	MM_PANEL2	f	SNP	C	C	C	C	C	C	T	C	C	C	C	C	C	C	C
SNP Consensus Information
SNP					Consensus Type	129S1/SvImJ	A/J	AKR/J	BALB/cByJ	BTBR T<+> Itpr3/J	C3H/HeJ	CAST/EiJ	DBA/2J	FVB/NJ	KK/HlJ	MOLF/EiJ	NOD/ShiLtJ	NZW/LacJ	PWD/PhJ	WSB/EiJ
rs36672817					SNP	C	C	C	C	C	C	T	C	C	C	C	C	C	C	C

Additional submitted assays for this SNP, where the strain of origin for observed alleles is not specified by the submitter

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	Alleles
ss51892390	NES14921489	PERLEGEN	MM_PANEL	f	SNP	C/T

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr7:51281820 () rs orientation: forward

Symbol	Name	Function Class
Gm45072	predicted gene 45072	within coordinates
Rr647265	regulatory region 647265	567 bp distal
Rr647266	regulatory region 647266	269 bp proximal
Slc17a6	solute carrier family 17 (sodium-dependent inorganic phosphate cotransporter), member 6	within coordinates