rs3667306 SNP Detail

Summary

• ID
  rs3667306
• Variation Type
  SNP
• Alleles
  C/G

• Created in dbSNP Build
  107
• Last Updated in dbSNP Build
  138
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr14:21845967 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                        CACTT CCAATAGCGT AACATTGACA
  S
  TGTAAGTGGT GACCAGCCCC ATTCT                                      
  
  S = C/G
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129S1/SvImJ	129X1/SvJ	A/J	BALB/cByJ	BTBR T<+> Itpr3/J	C57BL/6J	CAST/EiJ	DBA/2J	FVB/NJ	KK/HlJ	LG/J	MOLF/EiJ	MSM/Ms	NOD/ShiLtJ	NZW/LacJ	PWD/PhJ	SM/J
ss5043257	WI_WGS_14_16913460	WI	MOUSE	f	SNP	G					C
ss39245569	mCV23604459	ABI	CRAMUS_MOUSE	f	SNP		C	C			C		G
ss49167031	NES12508141	PERLEGEN	MM_PANEL2	f	SNP	G			G	G		C	G	G	G		G		G	G	G
ss139200320	ENSMUSSNP444210	ENSEMBL	ENSEMBL_Sanger	f	SNP		C	C					G					G
ss324566583	CHEV_14_22615121	CHEVERUD	SCREENING_POP	f	SNP											C						G
SNP Consensus Information
SNP					Consensus Type	129S1/SvImJ	129X1/SvJ	A/J	BALB/cByJ	BTBR T<+> Itpr3/J	C57BL/6J	CAST/EiJ	DBA/2J	FVB/NJ	KK/HlJ	LG/J	MOLF/EiJ	MSM/Ms	NOD/ShiLtJ	NZW/LacJ	PWD/PhJ	SM/J
rs3667306					SNP	G	C	C	G	G	C	C	G	G	G	C	G	G	G	G	G	G

Additional submitted assays for this SNP, where the strain of origin for observed alleles is not specified by the submitter

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	Alleles
ss49167031	NES12508141	PERLEGEN	MM_PANEL	f	SNP	C/G

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr14:21845967 () rs orientation: forward

Symbol	Name	Function Class
Samd8	sterile alpha motif domain containing 8	within coordinates
Tssr124451	transcription start site region 124451	1895 bp upstream
Tssr124452	transcription start site region 124452	1910 bp upstream