rs36673297 SNP Detail

Summary

• ID
  rs36673297
• Variation Type
  SNP
• Alleles
  A/G

• Created in dbSNP Build
  126
• Last Updated in dbSNP Build
  138
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr5:118012262 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                        GACCC GGTTCCCACG TACCCTCTGC
  R
  GAGGACCTGG TCAAGGCTGG GTGAA                                      
  
  R = A/G
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129S1/SvImJ	BALB/cByJ	CAST/EiJ	DBA/2J	FVB/NJ	LG/J	MOLF/EiJ	NOD/ShiLtJ	NZW/LacJ	PWD/PhJ	SM/J
ss51190921	NES13825922	PERLEGEN	MM_PANEL2	f	SNP	A	A	G	A	G		G	G	A	G
ss321660975	CHEV_5_118324206	CHEVERUD	SCREENING_POP	f	SNP						G					A
SNP Consensus Information
SNP					Consensus Type	129S1/SvImJ	BALB/cByJ	CAST/EiJ	DBA/2J	FVB/NJ	LG/J	MOLF/EiJ	NOD/ShiLtJ	NZW/LacJ	PWD/PhJ	SM/J
rs36673297					SNP	A	A	G	A	G	G	G	G	A	G	A

Additional submitted assays for this SNP, where the strain of origin for observed alleles is not specified by the submitter

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	Alleles
ss51190921	NES13825922	PERLEGEN	MM_PANEL	f	SNP	A/G

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr5:118012262 () rs orientation: forward

Symbol	Name	Function Class
Gm30360	predicted gene, 30360	within coordinates
Gm37028	predicted gene, 37028	1278 bp downstream
Nos1	nitric oxide synthase 1, neuronal	within coordinates
Rr618744	regulatory region 618744	85 bp distal