rs3667591 SNP Detail

Summary

• ID
  rs3667591
• Variation Type
  SNP
• Alleles
  A/C

• Created in dbSNP Build
  107
• Last Updated in dbSNP Build
  138
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr9:32607377 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                        ACTGC GCCAGCGCCG GCCAGCCGTG
  M
  GAGCGAGCAA GGGAGCGAGC GCCCC                                      
  
  M = A/C
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129S1/SvImJ	129X1/SvJ	A/J	C57BL/6J	DBA/2J
ss5043542	WI_WGS_9_32829122	WI	MOUSE	f	SNP	A			C
ss136249685	ENSMUSSNP5339768	ENSEMBL	ENSEMBL_Sanger	f	SNP		A	A		C
SNP Consensus Information
SNP					Consensus Type	129S1/SvImJ	129X1/SvJ	A/J	C57BL/6J	DBA/2J
rs3667591					SNP	A	A	A	C	C

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr9:32607377 () rs orientation: forward

Symbol	Name	Function Class
Cpgi21544	CpG island 21544	within coordinates
Ets1	E26 avian leukemia oncogene 1, 5' domain	within coordinates
Rr206170	regulatory region 206170	within coordinates
Rr401307	regulatory region 401307	5 bp downstream
Tssr84270	transcription start site region 84270	395 bp downstream
Tssr84271	transcription start site region 84271	376 bp downstream
Tssr84272	transcription start site region 84272	362 bp downstream
Tssr84273	transcription start site region 84273	306 bp downstream
Tssr84274	transcription start site region 84274	265 bp downstream
Tssr84275	transcription start site region 84275	within coordinates
Tssr84276	transcription start site region 84276	784 bp upstream
Tssr84277	transcription start site region 84277	905 bp upstream
Tssr84278	transcription start site region 84278	1846 bp upstream