rs3667591 SNP Detail

Summary

• ID
  rs3667591
• Variation Type
  SNP
• Alleles
  A/C

• Created in dbSNP Build
  107
• Last Updated in dbSNP Build
  138
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser | Alliance Variant
  

Genome Location and Flanking Sequence

• Location
  Chr9:32607377 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                        ACTGC GCCAGCGCCG GCCAGCCGTG
  M
  GAGCGAGCAA GGGAGCGAGC GCCCC                                      
  
  M = A/C
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129S1/SvImJ	129X1/SvJ	A/J	C57BL/6J	DBA/2J
ss5043542	WI_WGS_9_32829122	WI	MOUSE	f	SNP	A			C
ss136249685	ENSMUSSNP5339768	ENSEMBL	ENSEMBL_Sanger	f	SNP		A	A		C
SNP Consensus Information
SNP					Consensus Type	129S1/SvImJ	129X1/SvJ	A/J	C57BL/6J	DBA/2J
rs3667591					SNP	A	A	A	C	C

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr9:32607377 () rs orientation: forward

Symbol	Name	Transcript	Protein	Function Class	Allele	Residue	Codon Position	AA Position
Ets1	Ets proto-oncogene 1, transcription factor			Intron
				mRNA-UTR
Rr401307	regulatory region 401307			5 bp downstream
Rr676224	regulatory region 676224			1022 bp distal
Rr676225	regulatory region 676225			within coordinates
Rr676226	regulatory region 676226			314 bp proximal
Tssr84270	transcription start site region 84270			395 bp downstream
Tssr84271	transcription start site region 84271			376 bp downstream
Tssr84272	transcription start site region 84272			362 bp downstream
Tssr84273	transcription start site region 84273			306 bp downstream
Tssr84274	transcription start site region 84274			265 bp downstream
Tssr84275	transcription start site region 84275			within coordinates
Tssr84276	transcription start site region 84276			784 bp upstream
Tssr84277	transcription start site region 84277			905 bp upstream
Tssr84278	transcription start site region 84278			1846 bp upstream