rs3667842 SNP Detail

Summary

• ID
  rs3667842
• Variation Type
  SNP
• Alleles
  G/T

• Created in dbSNP Build
  107
• Last Updated in dbSNP Build
  138
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr14:21846027 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                        TTAGG ACTGAGAATT CCAAAACTCT
  K
  TAAGTTATAA GTGGGGAACA GGGGT                                      
  
  K = G/T
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129S1/SvImJ	129X1/SvJ	A/J	C57BL/6J	DBA/2J	LG/J	SM/J
ss5043794	WI_WGS_14_16913520	WI	MOUSE	f	SNP	T			G
ss39258932	mCV23604449	ABI	CRAMUS_MOUSE	f	SNP		G	G	G	T
ss139200323	ENSMUSSNP4254989	ENSEMBL	ENSEMBL_Sanger	f	SNP			G		T
ss324566584	CHEV_14_22615181	CHEVERUD	SCREENING_POP	f	SNP						G	T
SNP Consensus Information
SNP					Consensus Type	129S1/SvImJ	129X1/SvJ	A/J	C57BL/6J	DBA/2J	LG/J	SM/J
rs3667842					SNP	T	G	G	G	T	G	T

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr14:21846027 () rs orientation: forward

Symbol	Name	Function Class
Samd8	sterile alpha motif domain containing 8	within coordinates
Tssr124451	transcription start site region 124451	1835 bp upstream
Tssr124452	transcription start site region 124452	1850 bp upstream