rs3667961 SNP Detail

Summary

• ID
  rs3667961
• Variation Type
  SNP
• Alleles
  C/T

• Created in dbSNP Build
  107
• Last Updated in dbSNP Build
  138
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr5:92480870 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                        AGTTA ACATTCTGAA CTGTCTTTTT
  Y
  CCTCGGTCAG GGATTTATTC CTTTC                                      
  
  Y = C/T
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	A/J	C3H/HeJ	C57BL/6J	DBA/2J	LG/J	SM/J
ss5043915	WI_WGS_5_91991639	WI	MOUSE	f	SNP		T	C
ss45775824	mCV23365535	ABI	CRAMUS_MOUSE	f	SNP	C		C	T
ss148831557	ENSMUSSNP3133764	ENSEMBL	ENSEMBL_Sanger	f	SNP	C			T
ss321612289	CHEV_5_92762037	CHEVERUD	SCREENING_POP	f	SNP					T	C
SNP Consensus Information
SNP					Consensus Type	A/J	C3H/HeJ	C57BL/6J	DBA/2J	LG/J	SM/J
rs3667961					SNP	C	T	C	T	T	C

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr5:92480870 () rs orientation: forward

Symbol	Name	Function Class
Art3	ADP-ribosyltransferase 3	within coordinates
Rr125466	regulatory region 125466	69 bp distal
Tssr47295	transcription start site region 47295	1194 bp downstream
Tssr47296	transcription start site region 47296	1184 bp downstream
Tssr47297	transcription start site region 47297	1164 bp downstream