rs36682337 SNP Detail

Summary

• ID
  rs36682337
• Variation Type
  SNP
• Alleles
  A/G/T

• Created in dbSNP Build
  126
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr1:34465716 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                              GGCTTTTTAA AATTAACAGA
  AGGAACACTG AAAGCATGGC TCAAGTATCC TGAACCTGTC CAAGTTACTG TGGTGTTACA
  TAAGTATAGG AGTATCTCTC GGGCACAGAA TTACCTATAC AGAGCCCTTG TCCCAAGAGT
  GACTACAGTG ACTCAGCTGG GACCCGCTCA CAGCCATCTG CAGTGCCGAG GTCCCTGATA
  D
  CCTGTTACAG AGGAGTTAAG GGCTATTGCA CCATGATATG GGGGGTTGGC ATCAAGCAGA
  GCCAACAGTC CTCAGTCAGA TCTGTGTGAG ACTAATTAAG CACTTGGTGG GTGGCTTCAA
  GAAGATGTAA TGGGCCAGGG TTGATTAGGG GCCTCTGTGA GAGGTTCAGA CATGGGCTCA
  TCCATGCTGT GTGGTGGTAT                                            
  
  D = A/G/T
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129S1/SvImJ	129X1/SvJ	A/J	AKR/J	BALB/cByJ	C3H/HeJ	CAST/EiJ	DBA/2J	FVB/NJ	KK/HlJ	MOLF/EiJ	NOD/ShiLtJ	NZW/LacJ	PWD/PhJ	WSB/EiJ
ss51237519	NES14285854	PERLEGEN	MM_PANEL2	f	SNP	G		G	G	G	G	G	G	G	A	G	G	G	G	G
ss148888478	ENSMUSSNP5918549	ENSEMBL	ENSEMBL_Sanger	f	SNP		T	G					G
SNP Consensus Information
SNP					Consensus Type	129S1/SvImJ	129X1/SvJ	A/J	AKR/J	BALB/cByJ	C3H/HeJ	CAST/EiJ	DBA/2J	FVB/NJ	KK/HlJ	MOLF/EiJ	NOD/ShiLtJ	NZW/LacJ	PWD/PhJ	WSB/EiJ
rs36682337					SNP	G	T	G	G	G	G	G	G	G	A	G	G	G	G	G

Additional submitted assays for this SNP, where the strain of origin for observed alleles is not specified by the submitter

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	Alleles
ss51237519	NES14285854	PERLEGEN	MM_PANEL	f	SNP	A/G

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr1:34465716 () rs orientation: forward

Symbol	Name	Function Class
Gm37233	predicted gene, 37233	within coordinates