rs36686069 SNP Detail

Summary

• ID
  rs36686069
• Variation Type
  SNP
• Alleles
  A/G

• Created in dbSNP Build
  126
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr7:105243908 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                              TCATCCCCAA GTGACACCAA
  GCCCAGAGAC CTGGATGTAA GAACTAAGTA CCTTGGAAAA ATGGGGTTCC TGAAATAAAT
  TAATGGAATC CAATATACTC AAAAAAGGCA TGTGTACTAG CAAATGACAC AAAGAGGCAC
  AGAGTCACAG GGAGATCCAG AAGCAAGCAA GAACCAGGAG TCTCAGTGAG ATGCGCAACA
  R
  CAAGGGATGC AAGCAGGCAT GGACACACAG AGCTCCAGAG AGCAAGTGAC AGTCAGAGGA
  CTCAGCAGAG CAGGAGAAAC ATGAGAAGTT ACTATGGGTA GAGAGGTCCC ACAGAATACA
  CAGACAGGGG TGTAGATGAC ACTGAGAAGC AGACAGGTAA AAGACATGGA AGGAAGGCCT
  GGATGATGAG AGATAAGGTT                                            
  
  R = A/G
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	CAST/EiJ	FVB/NJ	NOD/ShiLtJ
ss51921049	NES14939951	PERLEGEN	MM_PANEL2	f	SNP	A	A	G
SNP Consensus Information
SNP					Consensus Type	CAST/EiJ	FVB/NJ	NOD/ShiLtJ
rs36686069					SNP	A	A	G

Additional submitted assays for this SNP, where the strain of origin for observed alleles is not specified by the submitter

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	Alleles
ss51921049	NES14939951	PERLEGEN	MM_PANEL	f	SNP	A/G

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr7:105243908 () rs orientation: forward

Symbol	Name	Function Class
Hpx	hemopexin	within coordinates
Tssr68381	transcription start site region 68381	1577 bp upstream
Tssr74058	transcription start site region 74058	403 bp downstream
Tssr74059	transcription start site region 74059	828 bp downstream
Tssr74060	transcription start site region 74060	839 bp downstream
Tssr74061	transcription start site region 74061	868 bp downstream
Tssr74062	transcription start site region 74062	906 bp downstream
Tssr74063	transcription start site region 74063	919 bp downstream
Tssr74064	transcription start site region 74064	944 bp downstream
Tssr74065	transcription start site region 74065	971 bp downstream
Tssr74066	transcription start site region 74066	1622 bp downstream
Tssr74067	transcription start site region 74067	1661 bp downstream
Tssr74068	transcription start site region 74068	1672 bp downstream
Tssr74069	transcription start site region 74069	1714 bp downstream