rs3668616 SNP Detail

Summary

• ID
  rs3668616
• Variation Type
  SNP
• Alleles
  G/T

• Created in dbSNP Build
  107
• Last Updated in dbSNP Build
  142
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr8:91859356 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                        ACTAA CTTGCTGACT TGCAGCCAGG
  K
  AGGGCTTTGC AAACCTGCTT TTAAA                                      
  
  K = G/T
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	A/J	BALB/cByJ	C57BL/6J	DBA/2J	LG/J	SM/J
ss5044574	WI_WGS_8_90888470	WI	MOUSE	f	SNP		G	T
ss46251378	mCV23191258	ABI	CRAMUS_MOUSE	f	SNP	T		T	G
ss145564017	ENSMUSSNP4321727	ENSEMBL	ENSEMBL_Sanger	f	SNP	T			G
ss322789569	CHEV_8_93656627	CHEVERUD	SCREENING_POP	f	SNP					G	G
SNP Consensus Information
SNP					Consensus Type	A/J	BALB/cByJ	C57BL/6J	DBA/2J	LG/J	SM/J
rs3668616					SNP	T	G	T	G	G	G

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr8:91859356 () rs orientation: forward

Symbol	Name	Function Class
Aktip	AKT interacting protein	within coordinates
Cpgi20808	CpG island 20808	690 bp proximal
Rr368579	regulatory region 368579	1354 bp upstream
Rr667489	regulatory region 667489	363 bp proximal
Rr667490	regulatory region 667490	1259 bp proximal
Tssr82405	transcription start site region 82405	1221 bp downstream
Tssr82406	transcription start site region 82406	1299 bp downstream