rs36688131 SNP Detail

Summary

• ID
  rs36688131
• Variation Type
  SNP
• Alleles
  A/C

• Created in dbSNP Build
  126
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr15:11954729 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                              AGGAATGTTT CCTGAAGGAG
  GTGAGGGAGC AAGATGAAGG CAGCCAGGTC TCTGATCTCA TGAGAAAACC TTGATGACGA
  GAATAAAGTA GGTCAAAGAC CAGAGAGTCA TAGCAAGAAC ATGAGCTTTG ACAGCATTTC
  AGTCCCATGG GAAGCACAGT GCTTGCAAGT GCAGGCCTAA CATCCGAGTG CCCAGGTGAC
  M
  ATGGAGAACT TGTCTTCTCT GGAGTTGAGG TTCCTGTTTG TATAGAGAAG GTTACAGTGG
  CATTTAGCTC ATGGAGATAA TAGAATGAAA GGAATCATCC TTATAAAGCA CCTTGAACAA
  TGCCTGACAC ATGGTCATCT CACAGTAAAT AACAAATAAT AGGGCAGACA AAATGGCCCA
  GCCAGGAGAG GAGCTTGCCA                                            
  
  M = A/C
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129S1/SvImJ	A/J	AKR/J	BALB/cByJ	BTBR T<+> Itpr3/J	C3H/HeJ	DBA/2J	FVB/NJ	KK/HlJ	MOLF/EiJ	NOD/ShiLtJ	NZW/LacJ	PWD/PhJ	WSB/EiJ
ss51583150	NES14600956	PERLEGEN	MM_PANEL2	f	SNP	A	A	A	A	A	A	A	A	A	C	A	A	C	A
SNP Consensus Information
SNP					Consensus Type	129S1/SvImJ	A/J	AKR/J	BALB/cByJ	BTBR T<+> Itpr3/J	C3H/HeJ	DBA/2J	FVB/NJ	KK/HlJ	MOLF/EiJ	NOD/ShiLtJ	NZW/LacJ	PWD/PhJ	WSB/EiJ
rs36688131					SNP	A	A	A	A	A	A	A	A	A	C	A	A	C	A

Additional submitted assays for this SNP, where the strain of origin for observed alleles is not specified by the submitter

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	Alleles
ss51583150	NES14600956	PERLEGEN	MM_PANEL	f	SNP	A/C

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr15:11954729 () rs orientation: forward

Symbol	Name	Function Class
Gm34618	predicted gene, 34618	704 bp downstream