rs3668905 SNP Detail

Summary

• ID
  rs3668905
• Variation Type
  SNP
• Alleles
  C/G

• Created in dbSNP Build
  107
• Last Updated in dbSNP Build
  142
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr11:88434160 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                        CAGCC TCAAGATTAC AATCAAAGTG
  S
  AGTTCCAGTG ATGGGTTGTA ACCCC                                      
  
  S = C/G
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129X1/SvJ	A/J	C3H/HeJ	C57BL/6J	DBA/2J
ss5044863	WI_WGS_11_89210256	WI	MOUSE	f	SNP			C	G
ss132535299	ENSMUSSNP5283434	ENSEMBL	ENSEMBL_Sanger	f	SNP	C	C			C
SNP Consensus Information
SNP					Consensus Type	129X1/SvJ	A/J	C3H/HeJ	C57BL/6J	DBA/2J
rs3668905					SNP	C	C	C	G	C

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr11:88434160 () rs orientation: forward

Symbol	Name	Function Class
Msi2	musashi RNA-binding protein 2	within coordinates
Rr454130	regulatory region 454130	1169 bp distal
Tssr110018	transcription start site region 110018	1688 bp upstream