rs36691011 SNP Detail

Summary

• ID
  rs36691011
• Variation Type
  SNP
• Alleles
  C/T

• Created in dbSNP Build
  126
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr6:32669123 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                              CAATAAATAA AATTAAATTA
  AAATTAAATA AAATGACAAA AAAATCAGCT GTACCTTCTA GAAGAACAAA AGTGAGATTG
  ATGCCATTCC AACACTCTTG ATCCTGACCA TGTCCTCCCC ACTTCACACA TCATACATTG
  GCTCTTCAAA CCAATCCCAT TCTCACCATC CTCCTTCATC ACTTTTTCTT GGTTGCTTCA
  Y
  TTGTTCCCAT TAGGACTATG CTTCTCCTGT AGTACTGTCC CTGGTCAGCA CCCCAGCCAT
  TCATTACCTG GCTATGCCCA TGCCCCAAAT GCAAGTGTTC TGGGAACAAA CCCAGCATTC
  TTCCTAGCAT AGCCTCACCT CCACTGCAGG TTTTCCTTCA TGAAGCTGAA TGGATTGGGA
  GTATTGAATC CAAAATCTCA                                            
  
  Y = C/T
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129S1/SvImJ	A/J	AKR/J	BALB/cByJ	BTBR T<+> Itpr3/J	C3H/HeJ	CAST/EiJ	DBA/2J	FVB/NJ	KK/HlJ	MOLF/EiJ	NOD/ShiLtJ	NZW/LacJ	PWD/PhJ	WSB/EiJ
ss51264465	NES13790666	PERLEGEN	MM_PANEL2	f	SNP	T	T	T	T	T	T	C	T	T	T	T	T	T	C	T
SNP Consensus Information
SNP					Consensus Type	129S1/SvImJ	A/J	AKR/J	BALB/cByJ	BTBR T<+> Itpr3/J	C3H/HeJ	CAST/EiJ	DBA/2J	FVB/NJ	KK/HlJ	MOLF/EiJ	NOD/ShiLtJ	NZW/LacJ	PWD/PhJ	WSB/EiJ
rs36691011					SNP	T	T	T	T	T	T	C	T	T	T	T	T	T	C	T

Additional submitted assays for this SNP, where the strain of origin for observed alleles is not specified by the submitter

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	Alleles
ss51264465	NES13790666	PERLEGEN	MM_PANEL	f	SNP	C/T

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr6:32669123 () rs orientation: forward

Symbol	Name	Function Class
Rr379152	regulatory region 379152	572 bp downstream