rs36694193 SNP Detail

Summary

• ID
  rs36694193
• Variation Type
  SNP
• Alleles
  A/G

• Created in dbSNP Build
  126
• Last Updated in dbSNP Build
  126
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr9:73001526 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                        CAAATACCAC AGAATGTTTA TCCCAGACAC TCCCTCCAAA
  GACCTTTTAT TTTTCGGTTT CTCAATCAAC GGGATACATA TACTTTATAG ACCCAAGGAC
  R
  TCTACAGTTT GATGGAGACA TATCAGATCC TCCCCTAGGC ACCTAAGCTA CTACATGGAG
  CCTATCTCTG GAGCCCGTCT TCTTGGAAGA AGTAACATAT                      
  
  R = A/G
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	A/J	AKR/J	BALB/cByJ	C3H/HeJ	FVB/NJ	KK/HlJ	NZW/LacJ	WSB/EiJ
ss50746394	NES14237757	PERLEGEN	MM_PANEL2	f	SNP	A	A	A	A	A	A	A	G
SNP Consensus Information
SNP					Consensus Type	A/J	AKR/J	BALB/cByJ	C3H/HeJ	FVB/NJ	KK/HlJ	NZW/LacJ	WSB/EiJ
rs36694193					SNP	A	A	A	A	A	A	A	G

Additional submitted assays for this SNP, where the strain of origin for observed alleles is not specified by the submitter

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	Alleles
ss50746394	NES14237757	PERLEGEN	MM_PANEL	f	SNP	A/G

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr9:73001526 () rs orientation: forward

Symbol	Name	Function Class
Cpgi22027	CpG island 22027	1038 bp proximal
Rab27a	RAB27A, member RAS oncogene family	within coordinates
Rr197297	regulatory region 197297	1926 bp distal
Rr206717	regulatory region 206717	474 bp proximal
Tssr86085	transcription start site region 86085	274 bp downstream
Tssr86086	transcription start site region 86086	582 bp upstream
Tssr86087	transcription start site region 86087	600 bp upstream