rs3669520 SNP Detail

Summary

• ID
  rs3669520
• Variation Type
  SNP
• Alleles
  A/C

• Created in dbSNP Build
  107
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr9:77468429 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                              CCTCCCTTCC ACCAAAGCCC
  CATTCTACTT TCACGTCTTT GTTTTTTCTT TGTGGCCCAC TAAGTTAAAA CAGGGTCACT
  CTCATGAGCA TGCATGTGCA GCTATCCACT GGAGCAGGAG TAACTCACCA GTGACTACAT
  TGTCATGACT AAAGACAATG ACTTCCTCAA CCCCCAGCAG CTCTTGTCTC CTATTGGCTC
  M
  CCTTGGGTAG GGCAAGGCCC CAAGAGCCCC TGTCTACACT CTTGTGATTT GGTGAGTGCT
  ATCCTGACAG AGAATCTTTT GTTTTGTATT TTTAGTATAT GTGTGCAATA CACATGAGTC
  AGGATTCACA TATGTGCTCA GGTATGTGTA TATGTTCATC CAAGGTTGAT GCTGCAAGGT
  CTCCTTGATC ACTCTTAGAT                                            
  
  M = A/C
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129S1/SvImJ	129X1/SvJ	A/J	C57BL/6J	DBA/2J
ss5045482	WI_WGS_9_78265501	WI	MOUSE	f	SNP	A			C
ss136659318	ENSMUSSNP6333075	ENSEMBL	ENSEMBL_Sanger	f	SNP		A	C		C
SNP Consensus Information
SNP					Consensus Type	129S1/SvImJ	129X1/SvJ	A/J	C57BL/6J	DBA/2J
rs3669520					SNP	A	A	C	C	C

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr9:77468429 () rs orientation: forward

Symbol	Name	Function Class
Gm69950	predicted gene, 69950	within coordinates
Rr212289	regulatory region 212289	434 bp proximal