rs36695822 SNP Detail

Summary

• ID
  rs36695822
• Variation Type
  SNP
• Alleles
  C/G

• Created in dbSNP Build
  126
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr18:71225743 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                              ACACACACAC ACATACACAC
  ACACACTCAC AAGCACACTC ACACACTCAC ACACACACAT AAACACACAC ACCAACTCAC
  AAATACACAA GTGCATGCAC ACACATACAC ACACACACAC ACACTTCTAC TGGCCATATA
  GAACTAAGGA AGAGCCCCCA GATGTGTCAT TTTGGATTGT CTTGGATTTA TAAGATGTGT
  S
  TTAAATTTAT AAGCTACAAA ACAGCAGGAC AATACTTATT TTTTTCATTT AAAATATTCC
  AATTCCCAAA CTGTGATAAA ATATTTCTTC TCTGATGCAT TTAGTCTGTG ATATTTTGTT
  ATGGTAACCT TAGCAACCTC ATGCGATTGG TTACTATGTG GTAGTGTCTG ACCTCCAAGC
  CTGAATTTCT GCTATAAGAT                                            
  
  S = C/G
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	BTBR T<+> Itpr3/J	CAST/EiJ	FVB/NJ	KK/HlJ	MOLF/EiJ	NOD/ShiLtJ	PWD/PhJ
ss50470090	NES13703550	PERLEGEN	MM_PANEL2	f	SNP	C	C	C	C	G	C	G
SNP Consensus Information
SNP					Consensus Type	BTBR T<+> Itpr3/J	CAST/EiJ	FVB/NJ	KK/HlJ	MOLF/EiJ	NOD/ShiLtJ	PWD/PhJ
rs36695822					SNP	C	C	C	C	G	C	G

Additional submitted assays for this SNP, where the strain of origin for observed alleles is not specified by the submitter

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	Alleles
ss50470090	NES13703550	PERLEGEN	MM_PANEL	f	SNP	C/G

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr18:71225743 () rs orientation: forward

Symbol	Name	Function Class
Rr393876	regulatory region 393876	1038 bp upstream