rs36698432 SNP Detail

Summary

• ID
  rs36698432
• Variation Type
  SNP
• Alleles
  G/T

• Created in dbSNP Build
  126
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr1:90810200 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                              GGAGAAAATG GGAGAGAGAG
  AAGGGGAAGA GAGAGAGAAG GAAGGGGCTG GTGTAGTGAC AAGCCTTCTT ATACACTACC
  AGGTCATCCA CACCTGGCAG TAGCATAGGT AGTAATGGTG GCAGGCGATG GTGTAACTGT
  TGCTTGGTCG CTGGGAGGAA TCTAGCAGAA CTGTTTGTAA ACCAACAACA ATGCTGGACT
  K
  CTACCTGGAA CTGTAAGCTC AAATAAACTC CTAGACATAC AGAGCCTCAC TGTACAGGAC
  ATTGCTTAGT CAGGTGATAA AGCTGAGGCA AGGGATTTTA AGACAGAGAA CACCCCACTT
  TAGGACATCC TGAACAAAGG GAATGTCTCT TAGCAACCCA GTGATATTGA GGTTCCAACC
  CTGTGATGCT GGACTTCAAG                                            
  
  K = G/T
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129S1/SvImJ	A/J	AKR/J	BALB/cByJ	BTBR T<+> Itpr3/J	C3H/HeJ	CAST/EiJ	DBA/2J	FVB/NJ	KK/HlJ	MOLF/EiJ	NOD/ShiLtJ	NZW/LacJ	PWD/PhJ	WSB/EiJ
ss51301814	NES14501092	PERLEGEN	MM_PANEL2	f	SNP	T	T	T	T	T	T	T	T	T	T	G	T	T	G	T
SNP Consensus Information
SNP					Consensus Type	129S1/SvImJ	A/J	AKR/J	BALB/cByJ	BTBR T<+> Itpr3/J	C3H/HeJ	CAST/EiJ	DBA/2J	FVB/NJ	KK/HlJ	MOLF/EiJ	NOD/ShiLtJ	NZW/LacJ	PWD/PhJ	WSB/EiJ
rs36698432					SNP	T	T	T	T	T	T	T	T	T	T	G	T	T	G	T

Additional submitted assays for this SNP, where the strain of origin for observed alleles is not specified by the submitter

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	Alleles
ss51301814	NES14501092	PERLEGEN	MM_PANEL	f	SNP	G/T

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr1:90810200 () rs orientation: forward

Symbol	Name	Function Class
Gm70606	predicted gene, 70606	within coordinates
Gm70611	predicted gene, 70611	544 bp downstream
Rr371697	regulatory region 371697	within coordinates