rs36701522 SNP Detail

Summary

• ID
  rs36701522
• Variation Type
  SNP
• Alleles
  A/G

• Created in dbSNP Build
  126
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr8:29717226 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                              CTTGAGAGTA AATAATGTGA
  CCACTGTAAA CAAAAATATT ATTAATATAA TTAATATTTA TTGCCTTATA CCAAATTATG
  GGAAAGCTCC AACAGTACTA GAAAAACGAA AATTTTCATA GGTTTAGATT CAATGATTAA
  AAATATAGTA GTTGCAATAA GGAGTAGATT TAATGGCAAG GATTACCATG GACAGATAAC
  R
  TATCATGAAC GATAGATCCT AAGAAATAAA CAGAATGACT ACATAAGAAA AAGCAAGCAG
  AAAGTGAAAG ATACAGAGAG AAGAATAAAA GGTGCCCATT ACACTTTGAG AGGTATCCAT
  TTAGAATTTT AGTATAAGTT AAAAAGCAAG GAATGTGTAT GCCATTGTTG AAGATATGAT
  GGTTGAAATG TTTCCATAAT                                            
  
  R = A/G
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129S1/SvImJ	A/J	AKR/J	BALB/cByJ	BTBR T<+> Itpr3/J	C3H/HeJ	CAST/EiJ	DBA/2J	FVB/NJ	KK/HlJ	MOLF/EiJ	NOD/ShiLtJ	NZW/LacJ	PWD/PhJ	WSB/EiJ
ss51948200	NES14964289	PERLEGEN	MM_PANEL2	f	SNP	G	G	G	G	G	G	A	G	G	G	A	G	G	A	G
SNP Consensus Information
SNP					Consensus Type	129S1/SvImJ	A/J	AKR/J	BALB/cByJ	BTBR T<+> Itpr3/J	C3H/HeJ	CAST/EiJ	DBA/2J	FVB/NJ	KK/HlJ	MOLF/EiJ	NOD/ShiLtJ	NZW/LacJ	PWD/PhJ	WSB/EiJ
rs36701522					SNP	G	G	G	G	G	G	A	G	G	G	A	G	G	A	G

Additional submitted assays for this SNP, where the strain of origin for observed alleles is not specified by the submitter

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	Alleles
ss51948200	NES14964289	PERLEGEN	MM_PANEL	f	SNP	A/G

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr8:29717226 () rs orientation: forward

Symbol	Name	Function Class
Gm32567	predicted gene, 32567	1442 bp downstream
Rr661573	regulatory region 661573	505 bp distal