rs36702046 SNP Detail

Summary

• ID
  rs36702046
• Variation Type
  SNP
• Alleles
  A/G

• Created in dbSNP Build
  126
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr10:126680181 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                              AATATTATAT TAATATAGCA
  CTATATTAAC ATATGTTATA TTAAATGTCT ATTAACATAT ATTATATCAT TAATATAATA
  CTAATTCTAT TATATTAATA TAATAAGTAA TATATATTAA TATATTTCAA ATGAAATTCT
  CAGAGTATAA TAAAAATTAA AGAAAAGAGA AAAGGTGGAG AACTAGCTGG GCACTGGTTG
  R
  AATCAGATGA CCTGAATTCA AGATGACTTC TGTGTAACTT TTGTTTCAGG TTGCTTTGCT
  TGTGGCCCTG TGTATCAGAC CTAGGGCTTC ACGCATAATA TGTGAGTTTT CTATCATTGA
  CCCACATCGT AGCCACAAGC TTTTCTACTC GGCCTCTTCA TACCCAGAAA AAATGATCCT
  GAGACTTATT TATGAATAAA                                            
  
  R = A/G
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129S1/SvImJ	A/J	AKR/J	BALB/cByJ	BTBR T<+> Itpr3/J	C3H/HeJ	CAST/EiJ	DBA/2J	FVB/NJ	KK/HlJ	NOD/ShiLtJ	NZW/LacJ	PWD/PhJ	WSB/EiJ
ss50943639	NES14265102	PERLEGEN	MM_PANEL2	f	SNP	G	G	G	G	G	G	A	G	G	G	G	G	G	G
SNP Consensus Information
SNP					Consensus Type	129S1/SvImJ	A/J	AKR/J	BALB/cByJ	BTBR T<+> Itpr3/J	C3H/HeJ	CAST/EiJ	DBA/2J	FVB/NJ	KK/HlJ	NOD/ShiLtJ	NZW/LacJ	PWD/PhJ	WSB/EiJ
rs36702046					SNP	G	G	G	G	G	G	A	G	G	G	G	G	G	G

Additional submitted assays for this SNP, where the strain of origin for observed alleles is not specified by the submitter

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	Alleles
ss50943639	NES14265102	PERLEGEN	MM_PANEL	f	SNP	A/G

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr10:126680181 () rs orientation: forward

Symbol	Name	Function Class
Gm66841	predicted gene, 66841	1607 bp upstream
Rr440688	regulatory region 440688	333 bp proximal
Rr440689	regulatory region 440689	568 bp proximal
Rr440690	regulatory region 440690	1117 bp proximal