rs3670291 SNP Detail

Summary

• ID
  rs3670291
• Variation Type
  SNP
• Alleles
  C/T

• Created in dbSNP Build
  107
• Last Updated in dbSNP Build
  142
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr8:91859604 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                        CTTCT GCCTTTAAAA ATTCAGTACA
  Y
  GGCCCTCAGT TCCTCCAAAA GGTAC                                      
  
  Y = C/T
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	A/J	BALB/cByJ	C57BL/6J	DBA/2J	LG/J	SM/J
ss5046255	WI_WGS_8_90888718	WI	MOUSE	f	SNP		C	T
ss46221477	mCV23191259	ABI	CRAMUS_MOUSE	f	SNP	T			C
ss145564020	ENSMUSSNP3498593	ENSEMBL	ENSEMBL_Sanger	f	SNP	T			C
ss322789570	CHEV_8_93656875	CHEVERUD	SCREENING_POP	f	SNP					C	C
SNP Consensus Information
SNP					Consensus Type	A/J	BALB/cByJ	C57BL/6J	DBA/2J	LG/J	SM/J
rs3670291					SNP	T	C	T	C	C	C

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr8:91859604 () rs orientation: forward

Symbol	Name	Function Class
Aktip	AKT interacting protein	within coordinates
Cpgi20808	CpG island 20808	442 bp proximal
Rr368579	regulatory region 368579	1106 bp upstream
Rr667489	regulatory region 667489	115 bp proximal
Rr667490	regulatory region 667490	1011 bp proximal
Tssr82405	transcription start site region 82405	973 bp downstream
Tssr82406	transcription start site region 82406	1051 bp downstream