rs36710118 SNP Detail

Summary

• ID
  rs36710118
• Variation Type
  SNP
• Alleles
  A/G

• Created in dbSNP Build
  126
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr3:131314297 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                              AGGCAGCTGC ATGTGATTGC
  CAGCTTGGAA CCTAGCTGAT CACTAATATG CACTAAGAGC CTGCAGCCTC TGTCCTTGGT
  GATGATAGAG GAGTGGAGGC AGGACAGCCA TGAGCCCAGC AGTCATCTTG TTGTGTAGAG
  TTCTGAGTGT GGATAGTGTC CTGCCTTACC ATTTGGGAGT TTCATAGCTC ATTTTCCTCC
  R
  TGAGGCTCCG TGACCGTTGA TGAGAGCACT TATGGGACCG AATCTCCTCT CCTCTCCTCT
  CCTCTCCTCT CCCTCTCCCT CTCCCTCTCT CCCTCCCTCT CCCTCTCCCT CTCCCTCTCC
  CTCTCCCTCT CCCTCTCCCT CTCCCTCTCC CTCTCCCTCT CCCTCTCCTT CCTTCCTTCC
  TTCCTTCCTT TCTCTCTGAC                                            
  
  R = A/G
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129S1/SvImJ	A/J	AKR/J	BALB/cByJ	BTBR T<+> Itpr3/J	C3H/HeJ	CAST/EiJ	DBA/2J	FVB/NJ	KK/HlJ	MOLF/EiJ	NOD/ShiLtJ	NZW/LacJ	PWD/PhJ	WSB/EiJ
ss51640877	NES14656458	PERLEGEN	MM_PANEL2	f	SNP	A	A	A	A	A	A	G	A	A	A	A	A	A	A	A
SNP Consensus Information
SNP					Consensus Type	129S1/SvImJ	A/J	AKR/J	BALB/cByJ	BTBR T<+> Itpr3/J	C3H/HeJ	CAST/EiJ	DBA/2J	FVB/NJ	KK/HlJ	MOLF/EiJ	NOD/ShiLtJ	NZW/LacJ	PWD/PhJ	WSB/EiJ
rs36710118					SNP	A	A	A	A	A	A	G	A	A	A	A	A	A	A	A

Additional submitted assays for this SNP, where the strain of origin for observed alleles is not specified by the submitter

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	Alleles
ss51640877	NES14656458	PERLEGEN	MM_PANEL	f	SNP	A/G

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr3:131314297 () rs orientation: forward

Symbol	Name	Function Class
Gm42881	predicted gene 42881	1901 bp downstream
Papss1	3'-phosphoadenosine 5'-phosphosulfate synthase 1	within coordinates
Rr74408	regulatory region 74408	81 bp distal
Rr74409	regulatory region 74409	757 bp proximal