rs36711221 SNP Detail

Summary

• ID
  rs36711221
• Variation Type
  SNP
• Alleles
  A/G

• Created in dbSNP Build
  126
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr6:59012583 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                              ACAAAAGCAC ACACACACAG
  AGCCAGAGAT TGAGACAGAG AGAGACAGAC ACAGAGAAAC ATACAGAGAC AGAGAGAAAG
  AGATAAGGAA ACAGGAAGGG AAGGAAGGAG GGAGGGAGGG AGGGAGGGAG AGAGAGAGAG
  AGAGAGAGAG AGAGAGAGAG GAATAATGCA GGTGCATATG AAAGAGCACA CTGTGGCAAG
  R
  CAAGGCCAGG TTCTTTGACT TTTTTTTCCT TTATATTTAT TCAGTCTTCT CTCATGTATT
  ACATCCAGGA CTGCAGTTTC CTGTCCCTCA CCTACCTTCA GTCTCTTTTC CCCACCTCCT
  CTTTTCCTCA AACCCATTCC CCTATTCACC TCTCCTCAGA AAATAGCAAG TCTTCTAGGG
  AGATCAATCA AACACAGCAT                                            
  
  R = A/G
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	BTBR T<+> Itpr3/J	C3H/HeJ	CAST/EiJ	MOLF/EiJ	PWD/PhJ	WSB/EiJ
ss51665184	NES14830120	PERLEGEN	MM_PANEL2	f	SNP	A	A	A	G	G	A
SNP Consensus Information
SNP					Consensus Type	BTBR T<+> Itpr3/J	C3H/HeJ	CAST/EiJ	MOLF/EiJ	PWD/PhJ	WSB/EiJ
rs36711221					SNP	A	A	A	G	G	A

Additional submitted assays for this SNP, where the strain of origin for observed alleles is not specified by the submitter

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	Alleles
ss51665184	NES14830120	PERLEGEN	MM_PANEL	f	SNP	A/G

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr6:59012583 () rs orientation: forward

Symbol	Name	Function Class
Gm19165	predicted gene, 19165	1291 bp upstream